RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 DECR1Q16698 335 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 FAM198BQ6UWH4 519 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 NHLRC1Q6VVB1 395 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 ERN2Q76MJ5 926 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 LINGO2Q7L985 606 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 CDH24Q86UP0 819 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR4E2Q8NGC2 313 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR4K13Q8NH42 304 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 SMPDL3BQ92485 455 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 ERVMER34-1Q9H9K5 563 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 MEPEQ9NQ76 525 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 MARK1Q9P0L2 795 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 HEATR5AQ86XA9 2040 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 IRGMA1A4Y4 181 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 MID1O15344 667 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 SIX6O95475 246 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 TFP02787 698 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 H2AFB2P0C5Z0 115 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 DRD2P14416 443 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 ATF4P18848 351 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 RAB3BP20337 219 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 RBMS1P29558 406 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 PLA2G7Q13093 441 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 FGL2Q14314 439 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZMYND11Q15326 602 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 HNRNPA1L2Q32P51 320 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 NDUFAF6Q330K2 333 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 BICRALQ6AI39 1079 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 NLRC3Q7RTR2 1065 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR52B4Q8NGK2 314 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF671Q8TAW3 534 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZPLD1Q8TCW7 415 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 PPP1R16AQ96I34 528 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 HHIPL1Q96JK4 782 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 NDC1Q9BTX1 674 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 ADGRL4Q9HBW9 690 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 POT1Q9NUX5 634 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 KLHL28Q9NXS3 571 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 ADAM18Q9Y3Q7 739 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 TRABD2BA6NFA1 517 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRR23D1E9PI22 279 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 LGALS8O00214 317 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 CLEC3AO75596 197 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR5F1O95221 314 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 ALDOBP05062 364 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 NGFRP08138 427 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 UCHL1P09936 223 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRR23D2P0DMB1 279 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 MPIP34949 423 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 GDNFP39905 211 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 ADH7P40394 386 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 RAD52P43351 418 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 PUDPQ08623 228 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 GALEQ14376 348 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 KCNAB1Q14722 419 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR1Q1Q15612 314 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 GRK1Q15835 563 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 MFSD12Q6NUT3 480 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 CNKSR3Q6P9H4 555 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 RD3Q7Z3Z2 195 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 BPHLQ86WA6 291 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 MS4A15Q8N5U1 240 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 SPERTQ8NA61 448 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 GALNT11Q8NCW6 608 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR56A1Q8NGH5 318 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 COX14Q96I36 57 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF514Q96K75 400 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 TNFRSF13CQ96RJ3 184 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 CD180Q99467 661 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 CA5BQ9Y2D0 317 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 A0A1B0GVT2 93 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 GXYLT2A0PJZ3 443 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 VEGFDO43915 354 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 MT-ND5P03915 603 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 SBK2P0C263 348 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 ANXA7P20073 488 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 AP2S1P53680 142 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 BTG1P62324 171 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 SNTB2Q13425 540 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 NNATQ16517 81 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 RPE65Q16518 533 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 AANATQ16613 207 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 ODF4Q2M2E3 257 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 MRM1Q6IN84 353 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 SLC25A25Q6KCM7 469 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 LUZP2Q86TE4 346 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 SLC44A3Q8N4M1 653 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 LINC00471Q8N535 108 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 UXS1Q8NBZ7 420 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 DNAAF1Q8NEP3 725 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR5T3Q8NGG3 340 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 TMEM239Q8WW34 195 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 UBL7Q96S82 380 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 ACTRT3Q9BYD9 372 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 NANSQ9NR45 359 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 MRPS2Q9Y399 296 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 ZNF780BQ9Y6R6 833 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 EML5Q05BV3 1969 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 TBC1D3BA6NDS4 549 aa9.58□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR2W5A6NFC9 320 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms