RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ADAM11O75078 769 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 KRT34O76011 436 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 AQP8O94778 261 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 PGM3O95394 542 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 NTN1O95631 604 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 HNRNPCL4P0DMR1 293 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 GPX2P18283 190 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 OPRM1P35372 400 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 SLC6A8P48029 635 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 IDH2P48735 452 aaKnown RBP8.29□□□□□ -1.08
SNHG1-215ENST00000540904 CARD18P57730 90 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 MTPNP58546 118 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 CDK6Q00534 326 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 MERTKQ12866 999 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 SELENBP1Q13228 472 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 CAPRIN1Q14444 709 aaKnown RBP8.29□□□□□ -1.08
SNHG1-215ENST00000540904 LARS2Q15031 903 aaKnown RBP8.29□□□□□ -1.08
SNHG1-215ENST00000540904 TMEM176BQ3YBM2 270 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-215ENST00000540904 MMEL1Q495T6 779 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 RUNDC3AQ59EK9 446 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 SLC25A53Q5H9E4 307 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 ZNF311Q5JNZ3 666 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 HBMQ6B0K9 141 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 OR2A2Q6IF42 318 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 MEX3BQ6ZN04 569 aaKnown RBP8.29□□□□□ -1.08
SNHG1-215ENST00000540904 ZNF836Q6ZNA1 936 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 ESPNLQ6ZVH7 1005 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 PLEKHM3Q6ZWE6 761 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 CNEP1R1Q8N9A8 125 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 BBS10Q8TAM1 723 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 ST8SIA1Q92185 356 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 OSTF1Q92882 214 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 ADGRG7Q96K78 797 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 ZFP3Q96NJ6 502 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 ANKRD27Q96NW4 1050 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 ELAC2Q9BQ52 826 aaKnown RBP8.29□□□□□ -1.08
SNHG1-215ENST00000540904 SFXN3Q9BWM7 321 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 PRRG4Q9BZD6 226 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 SERINC1Q9NRX5 453 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 ACER3Q9NUN7 267 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 PAQR5Q9NXK6 330 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-215ENST00000540904 DNAJB12Q9NXW2 375 aaKnown RBP8.29□□□□□ -1.08
SNHG1-215ENST00000540904 ARMCX1Q9P291 453 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 ZNF443Q9Y2A4 671 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-215ENST00000540904 IFT52Q9Y366 437 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 ZNF175Q9Y473 711 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 GMEB1Q9Y692 573 aa8.29□□□□□ -1.08
SNHG1-215ENST00000540904 UTP20O75691 2785 aaKnown RBP8.29□□□□□ -1.08
SNHG1-215ENST00000540904 A0A1W2PNV4 684 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 CDHR4A6H8M9 788 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 ETV2O00321 342 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-215ENST00000540904 AP3D1O14617 1153 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 CCDC22O60826 627 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 SYNGR4O95473 234 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 IL18BPO95998 194 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 THBS1P07996 1170 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 GKN3PP0CG01 181 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 ARAFP10398 606 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 FCGR2AP12318 317 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 SLC6A2P23975 617 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 AQP1P29972 269 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 SLC7A1P30825 629 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 UQCRC1P31930 480 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 LSP1P33241 339 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 ASCL1P50553 236 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 EEF1A1P68104 462 aaKnown RBP8.28□□□□□ -1.08
SNHG1-215ENST00000540904 SIRPAP78324 504 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 CYLC2Q14093 348 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-215ENST00000540904 SCARB2Q14108 478 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 SELPLGQ14242 412 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 MAPRE2Q15555 327 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 ADRM1Q16186 407 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 CYP51A1Q16850 503 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 TRMT5Q32P41 509 aaKnown RBP8.28□□□□□ -1.08
SNHG1-215ENST00000540904 PDSS1Q5T2R2 415 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 RNF220Q5VTB9 566 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 PRAMEF8Q5VWM4 474 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 PRAMEF7Q5VXH5 474 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 REP15Q6BDI9 236 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 REEP3Q6NUK4 255 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 C3orf33Q6P1S2 294 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 GRINAQ7Z429 371 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 SPATA21Q7Z572 469 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 LUZP2Q86TE4 346 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 SNX32Q86XE0 403 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 KRT73Q86Y46 540 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 ZNF440Q8IYI8 595 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 CLIP4Q8N3C7 705 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 OR5B2Q96R09 309 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 SLC39A3Q9BRY0 314 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 CCDC106Q9BWC9 280 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 TMEM38AQ9H6F2 299 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 ARMC7Q9H6L4 198 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 RNF122Q9H9V4 155 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 BCL2L10Q9HD36 194 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 TIGARQ9NQ88 270 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 CTPS2Q9NRF8 586 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 MCTS1Q9ULC4 181 aaKnown RBP8.28□□□□□ -1.08
SNHG1-215ENST00000540904 CAPN7Q9Y6W3 813 aa8.28□□□□□ -1.08
SNHG1-215ENST00000540904 PCNX1Q96RV3 2341 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms