RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 FBXO30Q8TB52 745 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 DYDC1Q8WWB3 177 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 PROX1Q92786 737 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 CHMP6Q96FZ7 201 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 C16orf58Q96GQ5 468 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 MRGPRX4Q96LA9 322 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 ZNF300Q96RE9 604 aaPredicted RBP6.43□□□□□ -1.38
YBX3-209ENST00000540747 CCT7Q99832 543 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 BTBD2Q9BX70 525 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 AMBRA1Q9C0C7 1298 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 NSRP1Q9H0G5 558 aaKnown RBP6.43□□□□□ -1.38
YBX3-209ENST00000540747 MANSC1Q9H8J5 431 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 TIGARQ9NQ88 270 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 DUSP22Q9NRW4 184 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 ACSS1Q9NUB1 689 aaPredicted RBP6.43□□□□□ -1.38
YBX3-209ENST00000540747 INTS9Q9NV88 658 aaKnown RBP6.43□□□□□ -1.38
YBX3-209ENST00000540747 GIN1Q9NXP7 522 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 KLHL9Q9P2J3 617 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 EMCNQ9ULC0 261 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 SLC25A15Q9Y619 301 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 GPC6Q9Y625 555 aaPredicted RBP6.43□□□□□ -1.38
YBX3-209ENST00000540747 CAPN7Q9Y6W3 813 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 IGHV3-15A0A0B4J1V0 119 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 A0A1W2PNR3 127 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 GJE1A6NN92 205 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 ZNF716A6NP11 495 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 G3V2L1 256 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 SCDO00767 359 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 WIPF1O43516 503 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 LMX1BO60663 402 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 VIMP08670 466 aaKnown RBP6.42□□□□□ -1.38
YBX3-209ENST00000540747 CSF3P09919 207 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 SRD5A1P18405 259 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 SDC1P18827 310 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 GGT1P19440 569 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 DRD4P21917 467 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 USF1P22415 310 aaPredicted RBP6.42□□□□□ -1.38
YBX3-209ENST00000540747 PTAFRP25105 342 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 CD40P25942 277 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 NTF4P34130 210 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 SERPINB4P48594 390 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 P2RX1P51575 399 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 EFNA4P52798 201 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 SELENBP1Q13228 472 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 MLC1Q15049 377 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 PDK3Q15120 406 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 STK11Q15831 433 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 NDUFAF6Q330K2 333 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 SPDYAQ5MJ70 313 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 ZNF544Q6NX49 715 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 RNF165Q6ZSG1 346 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 FRMD7Q6ZUT3 714 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 MUC15Q8N387 334 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 ANKS4BQ8N8V4 417 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 CCDC197Q8NCU1 140 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 PSMA8Q8TAA3 256 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 MZB1Q8WU39 189 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 FAM168AQ92567 244 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 HTRA1Q92743 480 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 MSI2Q96DH6 328 aaKnown RBP6.42□□□□□ -1.38
YBX3-209ENST00000540747 MUCL1Q96DR8 90 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 FAM120BQ96EK7 910 aaKnown RBP6.42□□□□□ -1.38
YBX3-209ENST00000540747 OTUB1Q96FW1 271 aaPredicted RBP6.42□□□□□ -1.38
YBX3-209ENST00000540747 REXO5Q96IC2 774 aaKnown RBP6.42□□□□□ -1.38
YBX3-209ENST00000540747 STACQ99469 402 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 PRR14Q9BWN1 585 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 SHARPINQ9H0F6 387 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 PIGUQ9H490 435 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 REEP4Q9H6H4 257 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 MID1IP1Q9NPA3 183 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 KCNK9Q9NPC2 374 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 MALT1Q9UDY8 824 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 MGAT4BQ9UQ53 548 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 CARD8Q9Y2G2 431 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 PTGDR2Q9Y5Y4 395 aa6.42□□□□□ -1.38
YBX3-209ENST00000540747 NPIPA5A0A0B4J1W7 369 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 NPIPA7E9PJI5 369 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 POC1B-GALNT4F8VUJ3 575 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 LY6HO94772 140 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 HMGN2P05204 90 aaKnown RBP6.41□□□□□ -1.38
YBX3-209ENST00000540747 ITGA5P08648 1049 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 ABHD2P08910 425 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 ALOX5P09917 674 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 DHRS4L1P0CG22 281 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 NPIPA8P0DM63 369 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 GPC1P35052 558 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 GZMKP49863 264 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 SLC16A1P53985 500 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 PRKAG1P54619 331 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 FOXG1P55316 489 aaPredicted RBP6.41□□□□□ -1.38
YBX3-209ENST00000540747 POU6F2P78424 691 aaPredicted RBP6.41□□□□□ -1.38
YBX3-209ENST00000540747 LSM11P83369 360 aaKnown RBP eCLIP6.41□□□□□ -1.38
YBX3-209ENST00000540747 SLC25A3Q00325 362 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 RASGEF1BQ0VAM2 473 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 SKP2Q13309 424 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 SWI5Q1ZZU3 235 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 MST1LQ2TV78 715 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 FAM120AOSQ5T036 256 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 FBXW9Q5XUX1 488 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 CDC73Q6P1J9 531 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms