RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 IL12AP29459 219 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 RAC3P60763 192 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 MAGOHP61326 146 aaKnown RBP18.69■□□□□ 0.58
CHFR-217ENST00000540537 ADAM8P78325 824 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 TXNL4AP83876 142 aaKnown RBP18.69■□□□□ 0.58
CHFR-217ENST00000540537 FOXD4Q12950 439 aaPredicted RBP18.69■□□□□ 0.58
CHFR-217ENST00000540537 MAPK14Q16539 360 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 TIGD2Q4W5G0 525 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 FRRS1Q6ZNA5 592 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 ZNF619Q8N2I2 560 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 TRIML2Q8N7C3 387 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 TMEM234Q8WY98 164 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 TLCD1Q96CP7 247 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 TACO1Q9BSH4 297 aaKnown RBP18.69■□□□□ 0.58
CHFR-217ENST00000540537 C12orf49Q9H741 205 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 ACER3Q9NUN7 267 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 NKIRAS1Q9NYS0 192 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 GPR52Q9Y2T5 361 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 GPR45Q9Y5Y3 372 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 ROS1P08922 2347 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 ARID1AO14497 2285 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 PRR14LQ5THK1 2151 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 PRKD3O94806 890 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 PGRP06401 933 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 THBDP07204 575 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 PSMB1P20618 241 aaKnown RBP18.68■□□□□ 0.58
CHFR-217ENST00000540537 LOXP28300 417 aaPredicted RBP18.68■□□□□ 0.58
CHFR-217ENST00000540537 PGM1P36871 562 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 SESN3P58005 492 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 HPCAP84074 193 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 TFAP2EQ6VUC0 442 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 CXorf67Q86X51 503 aaPredicted RBP18.68■□□□□ 0.58
CHFR-217ENST00000540537 TUSC5Q8IXB3 177 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 GLB1L3Q8NCI6 653 aaPredicted RBP18.68■□□□□ 0.58
CHFR-217ENST00000540537 PANX1Q96RD7 426 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 ZBTB18Q99592 522 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 PIP5K1AQ99755 562 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 WDR55Q9H6Y2 383 aaPredicted RBP18.68■□□□□ 0.58
CHFR-217ENST00000540537 TMBIM4Q9HC24 238 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 SERINC1Q9NRX5 453 aa18.68■□□□□ 0.58
CHFR-217ENST00000540537 GOLGA8QA0A0J9YX86 632 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 A0A1W2PNR3 127 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 GOLGA8OA6NCC3 632 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 CCDC154A6NI56 674 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 GOLGA8NF8WBI6 632 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 HMGN4O00479 90 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 H6PDO95479 791 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 KITP10721 976 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 ANXA11P50995 505 aaKnown RBP18.67■□□□□ 0.58
CHFR-217ENST00000540537 GPAT3Q53EU6 434 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 BEX5Q5H9J7 111 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 BEND6Q5SZJ8 279 aaPredicted RBP18.67■□□□□ 0.58
CHFR-217ENST00000540537 NUFIP2Q7Z417 695 aaKnown RBP18.67■□□□□ 0.58
CHFR-217ENST00000540537 RNF130Q86XS8 419 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 MAELQ96JY0 434 aaKnown RBP18.67■□□□□ 0.58
CHFR-217ENST00000540537 HS3ST6Q96QI5 342 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 OR52E6Q96RD3 313 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 ACTR6Q9GZN1 396 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 QRSL1Q9H0R6 528 aaKnown RBP18.67■□□□□ 0.58
CHFR-217ENST00000540537 MANSC1Q9H8J5 431 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 KLHL9Q9P2J3 617 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 LIPT1Q9Y234 373 aa18.67■□□□□ 0.58
CHFR-217ENST00000540537 DSCAMO60469 2012 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 PRAMEF27A3QJZ7 478 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 C9JVG2 144 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 YES1P07947 543 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 IDO1P14902 403 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 FPR1P21462 350 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 ENPP1P22413 925 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 HOXC12P31275 282 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 MERTKQ12866 999 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 ACKR1Q16570 336 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 PDCD4Q53EL6 469 aaKnown RBP18.66■□□□□ 0.58
CHFR-217ENST00000540537 PLEKHM3Q6ZWE6 761 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 STEAP2Q8NFT2 490 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 SLC25A43Q8WUT9 341 aaPredicted RBP18.66■□□□□ 0.58
CHFR-217ENST00000540537 PIGTQ969N2 578 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 ZG16BQ96DA0 208 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 TRNT1Q96Q11 434 aaKnown RBP18.66■□□□□ 0.58
CHFR-217ENST00000540537 OR5B2Q96R09 309 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 INPP5KQ9BT40 448 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 BCO1Q9HAY6 547 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 EXOSC3Q9NQT5 275 aaKnown RBP18.66■□□□□ 0.58
CHFR-217ENST00000540537 DLL4Q9NR61 685 aa18.66■□□□□ 0.58
CHFR-217ENST00000540537 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.66■□□□□ 0.58
CHFR-217ENST00000540537 RAI1Q7Z5J4 1906 aaPredicted RBP18.66■□□□□ 0.58
CHFR-217ENST00000540537 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.65■□□□□ 0.58
CHFR-217ENST00000540537 KLF4O43474 513 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 BCAS1O75363 584 aaPredicted RBP18.65■□□□□ 0.58
CHFR-217ENST00000540537 GCM2O75603 506 aaPredicted RBP18.65■□□□□ 0.58
CHFR-217ENST00000540537 C1QCP02747 245 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 FOSL1P15407 271 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 APOBEC1P41238 236 aaKnown RBP18.65■□□□□ 0.58
CHFR-217ENST00000540537 CDKN2CP42773 168 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 KCNJ10P78508 379 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 CHRNEQ04844 493 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 NXNQ6DKJ4 435 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 C20orf204Q6ZNR8 217 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 ZNF621Q6ZSS3 439 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 GABRG1Q8N1C3 465 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms