RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 HCN3Q9P1Z3 774 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 SIGLEC7Q9Y286 467 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 MRPS7Q9Y2R9 242 aaKnown RBP13□□□□□ -0.33
UBE3B-210ENST00000539599 MPDZO75970 2070 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 TRAV6A0A075B6T7 132 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 IDSB3KWA1 339 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 PRR23D1E9PI22 279 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-210ENST00000539599 EEF1E1O43324 174 aaKnown RBP12.99□□□□□ -0.33
UBE3B-210ENST00000539599 RGS9O75916 674 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-210ENST00000539599 FAM157BP0CG42 384 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 PRR23D2P0DMB1 279 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-210ENST00000539599 ALAS2P22557 587 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 TLX1P31314 330 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-210ENST00000539599 INPP1P49441 399 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 MGAT2Q10469 447 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 SHHQ15465 462 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 GPR135Q8IZ08 494 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 GATSQ8NAP1 163 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 OR52N1Q8NH53 320 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 NT5CQ8TCD5 201 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 MRGPRX1Q96LB2 322 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 LMF1Q96S06 567 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 GDF15Q99988 308 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 ZFYVE21Q9BQ24 234 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 HRASLS2Q9NWW9 162 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 A6NCN8 305 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 CYR61O00622 381 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 CRYZQ08257 329 aaKnown RBP12.99□□□□□ -0.33
UBE3B-210ENST00000539599 KRT74Q7RTS7 529 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 OR13H1Q8NG92 308 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 SCARF2Q96GP6 870 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-210ENST00000539599 NKX2-4Q9H2Z4 354 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 ADGRL4Q9HBW9 690 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 RBFOX1Q9NWB1 397 aaKnown RBP12.99□□□□□ -0.33
UBE3B-210ENST00000539599 PHF11Q9UIL8 331 aa12.99□□□□□ -0.33
UBE3B-210ENST00000539599 A0A1B0GWA3 101 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 IRGMA1A4Y4 181 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 RGS13O14921 159 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 CBX7O95931 251 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 THBS2P35442 1172 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 PSMB10P40306 273 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 TSFMP43897 325 aaKnown RBP12.98□□□□□ -0.33
UBE3B-210ENST00000539599 SRP54P61011 504 aaKnown RBP12.98□□□□□ -0.33
UBE3B-210ENST00000539599 FAAH2Q6GMR7 532 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 SLC22A18ASQ8N1D0 253 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 SMPDL3BQ92485 455 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 ABHD1Q96SE0 405 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 TEX12Q9BXU0 123 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 NDEL1Q9GZM8 345 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 ANKRD19PQ9H560 264 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 BEX1Q9HBH7 125 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 ISYNA1Q9NPH2 558 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 OBP2AQ9NY56 170 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 HEBP2Q9Y5Z4 205 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 SEC16AO15027 2179 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 ANKRD34BA5PLL1 514 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 CHST10O43529 356 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 TFP02787 698 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 HMGN1P05114 100 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 POU2F2P09086 479 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 SNRPBP14678 240 aaKnown RBP12.98□□□□□ -0.33
UBE3B-210ENST00000539599 RPS5P46782 204 aaKnown RBP12.98□□□□□ -0.33
UBE3B-210ENST00000539599 Q6ZSR6 202 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 GJD3Q8N144 294 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 OR52E2Q8NGJ4 325 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 BRIX1Q8TDN6 353 aaKnown RBP12.98□□□□□ -0.33
UBE3B-210ENST00000539599 RERGQ96A58 199 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-210ENST00000539599 SPACA7Q96KW9 195 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 C1QTNF7Q9BXJ2 289 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 A0A0A6YYC8 382 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-210ENST00000539599 SLC9B1P1A6NJY1 282 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 I3L1I5 382 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-210ENST00000539599 SEC14L5O43304 696 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 DBIP07108 87 aaKnown RBP12.98□□□□□ -0.33
UBE3B-210ENST00000539599 CD3GP09693 182 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 BMP8BP34820 402 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 GPR176Q14439 515 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 AMZ1Q400G9 498 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 TRILQ7L0X0 811 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 BMP8AQ7Z5Y6 402 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 OAFQ86UD1 273 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 CA13Q8N1Q1 262 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 LNX2Q8N448 690 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 CSNK1A1LQ8N752 337 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 AVL9Q8NBF6 648 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 LILRB4Q8NHJ6 448 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 HSD17B8Q92506 261 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 ANKRD9Q96BM1 317 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-210ENST00000539599 WBP1LQ9NX94 342 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 MRPL15Q9P015 296 aaKnown RBP12.98□□□□□ -0.33
UBE3B-210ENST00000539599 NTMQ9P121 344 aa12.98□□□□□ -0.33
UBE3B-210ENST00000539599 C17orf51A8MQB3 221 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 SBK2P0C263 348 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 ST6GAL1P15907 406 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 RPS4Y1P22090 263 aaKnown RBP12.97□□□□□ -0.33
UBE3B-210ENST00000539599 PGDP52209 483 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 PSG6Q00889 435 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 HYAL1Q12794 435 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 FHL1Q13642 323 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 SDE2Q6IQ49 451 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms