RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 MRPL3P09001 348 aaKnown RBP8.95□□□□□ -0.98
CDH13-204ENST00000539548 ANKRD34CP0C6C1 535 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 GKN3PP0CG01 181 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 LAMP2P13473 410 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 ATF1P18846 271 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 NOS3P29474 1203 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 PYCR1P32322 319 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 BMP8BP34820 402 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 CCR6P51684 374 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 SLC16A1P53985 500 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 HTRA4P83105 476 aaPredicted RBP8.95□□□□□ -0.98
CDH13-204ENST00000539548 TNFRSF17Q02223 184 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 POU4F2Q12837 409 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 SNTB2Q13425 540 aaKnown RBP8.95□□□□□ -0.98
CDH13-204ENST00000539548 KLF9Q13886 244 aaPredicted RBP8.95□□□□□ -0.98
CDH13-204ENST00000539548 IRF4Q15306 451 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 AMZ1Q400G9 498 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 CLLU1Q5K131 121 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 EXOSC6Q5RKV6 272 aaKnown RBP8.95□□□□□ -0.98
CDH13-204ENST00000539548 RPTNQ6XPR3 784 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 BMP8AQ7Z5Y6 402 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 SLC38A6Q8IZM9 456 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 ZNF687Q8N1G0 1237 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 KCT2Q8NC54 265 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 OR13C2Q8NGS9 318 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 OR5J2Q8NH18 312 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 OR4C6Q8NH72 309 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 OR56B4Q8NH76 319 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 COL26A1Q96A83 441 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 ZFP3Q96NJ6 502 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 DLL4Q9NR61 685 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 KCMF1Q9P0J7 381 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 NUP50Q9UKX7 468 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 MED31Q9Y3C7 131 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 PLEKHM1Q9Y4G2 1056 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 OR52A4PA6NMU1 304 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 FLRT2O43155 660 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 FKTNO75072 461 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 STX11O75558 287 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 ARL6IP5O75915 188 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 CLTBP09497 229 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 ACRP10323 421 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 NID1P14543 1247 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 SNRPBP14678 240 aaKnown RBP8.94□□□□□ -0.98
CDH13-204ENST00000539548 ZNF3P17036 446 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 NT5EP21589 574 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 DNASE1P24855 282 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 ITGB8P26012 769 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 CRMP1Q14194 572 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 MRPL2Q5T653 305 aaKnown RBP8.94□□□□□ -0.98
CDH13-204ENST00000539548 AGBL4Q5VU57 503 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 FAAH2Q6GMR7 532 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 USP53Q70EK8 1073 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 OVCH1Q7RTY7 1134 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 VN1R4Q7Z5H5 301 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 PAQR7Q86WK9 346 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 SPERTQ8NA61 448 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 FAM98AQ8NCA5 519 aaKnown RBP8.94□□□□□ -0.98
CDH13-204ENST00000539548 OR4D9Q8NGE8 314 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 NT5CQ8TCD5 201 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 GIMAP1Q8WWP7 306 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 THAP4Q8WY91 577 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 NXPE2Q96DL1 559 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 DPCDQ9BVM2 203 aaPredicted RBP8.94□□□□□ -0.98
CDH13-204ENST00000539548 GSDMCQ9BYG8 508 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 NARFLQ9H6Q4 476 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 SPATA2Q9UM82 520 aa8.94□□□□□ -0.98
CDH13-204ENST00000539548 C19orf53Q9UNZ5 99 aaPredicted RBP8.94□□□□□ -0.98
CDH13-204ENST00000539548 MRPS7Q9Y2R9 242 aaKnown RBP8.94□□□□□ -0.98
CDH13-204ENST00000539548 ZNF593O00488 134 aaPredicted RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 ITGA10O75578 1167 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 GATBO75879 557 aaKnown RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 CD1AP06126 327 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 CEACAM5P06731 702 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 SYPP08247 313 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 UCHL1P09936 223 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 ZNF888P0CJ79 500 aaPredicted RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 SMIM10L1P0DMW3 83 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 CLUP10909 449 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 RPS15AP62244 130 aaKnown RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 DBPQ10586 325 aaPredicted RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 SNTA1Q13424 505 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 GAS6Q14393 721 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 FGFBP1Q14512 234 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 GRK1Q15835 563 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 DCST2Q5T1A1 773 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 FHL5Q5TD97 284 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 SEZ6L2Q6UXD5 910 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 HDDC2Q7Z4H3 204 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 SLC43A2Q8N370 569 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 OR13C5Q8NGS8 318 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 OR51Q1Q8NH59 317 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 RPLP0P6Q8NHW5 317 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 LRRC20Q8TCA0 184 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 SMIM4Q8WVI0 70 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 PMM1Q92871 262 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 ZNF707Q96C28 371 aaPredicted RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 SMIM10Q96HG1 83 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 MS4A3Q96HJ5 214 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 RNF208Q9H0X6 261 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms