RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 ZNF620Q6ZNG0 422 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 IKBIPQ70UQ0 350 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 LRP11Q86VZ4 500 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 SAMD14Q8IZD0 417 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-217ENST00000537162 C2CD4AQ8NCU7 369 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-217ENST00000537162 C1orf162Q8NEQ5 155 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-217ENST00000537162 OR4F15Q8NGB8 312 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 OR52E2Q8NGJ4 325 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 SLC47A1Q96FL8 570 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 PDLIM5Q96HC4 596 aaKnown RBP8.03□□□□□ -1.12
CPSF7-217ENST00000537162 ZNF681Q96N22 645 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 ANKRD27Q96NW4 1050 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 SLC7A10Q9NS82 523 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 CACNG2Q9Y698 323 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 PPIAL4EA0A075B759 164 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 IGKV3D-15A0A087WSY6 115 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 PPIAL4CA0A0B4J2A2 164 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 ZNF716A6NP11 495 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 PPIAL4DF5H284 164 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 M0R233 179 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 NR5A2O00482 541 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 XPNPEP2O43895 674 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 GPR137BO60478 399 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 MELTFP08582 738 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 CCDC175P0C221 793 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 MYZAPP0CAP1 466 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 PPIAL4FP0DN26 164 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 NAT2P11245 290 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 ZNF12P17014 697 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 CSNK2A2P19784 350 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-217ENST00000537162 MSX2P35548 267 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-217ENST00000537162 PRIM2P49643 509 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 CLK3P49761 638 aaKnown RBP8.02□□□□□ -1.13
CPSF7-217ENST00000537162 MRPS11P82912 194 aaKnown RBP8.02□□□□□ -1.13
CPSF7-217ENST00000537162 SNX1Q13596 522 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 ZNF460Q14592 562 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 TRIP13Q15645 432 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-217ENST00000537162 NKAPLQ5M9Q1 402 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 KRT77Q7Z794 578 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 GSPT2Q8IYD1 628 aaKnown RBP8.02□□□□□ -1.13
CPSF7-217ENST00000537162 FBXO27Q8NI29 283 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 ANKRD49Q8WVL7 239 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 FAM167BQ9BTA0 163 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 ACSS3Q9H6R3 686 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 PAK5Q9P286 719 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 DCTN4Q9UJW0 460 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 PCDHA9Q9Y5H5 950 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 INSIG2Q9Y5U4 225 aa8.02□□□□□ -1.13
CPSF7-217ENST00000537162 TRAV40A0A0B4J280 105 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 CXorf49A8MYA2 514 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-217ENST00000537162 CCNT2O60583 730 aaKnown RBP8.01□□□□□ -1.13
CPSF7-217ENST00000537162 H6PDO95479 791 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 IGLV1-44P01699 117 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 PTMAP06454 111 aaKnown RBP8.01□□□□□ -1.13
CPSF7-217ENST00000537162 RAD52P43351 418 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 MAGEA1P43355 309 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 CDK5R2Q13319 367 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 TGFBIQ15582 683 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 TRADDQ15628 312 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 TOMM34Q15785 309 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-217ENST00000537162 OTUD3Q5T2D3 398 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-217ENST00000537162 TSPO2Q5TGU0 170 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 ZFAND6Q6FIF0 208 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 ABLIM2Q6H8Q1 611 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 KRT80Q6KB66 452 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 KLHL24Q6TFL4 600 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 FRA10AC1Q70Z53 315 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 NUDT13Q86X67 352 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 ZSCAN4Q8NAM6 433 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-217ENST00000537162 OR7G2Q8NG99 324 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 OR9A2Q8NGT5 310 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 OR4C3Q8NH37 302 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 ACTRT2Q8TDY3 377 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 C1orf54Q8WWF1 131 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 KLHL29Q96CT2 875 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 MMP28Q9H239 520 aa8.01□□□□□ -1.13
CPSF7-217ENST00000537162 CRNNQ9UBG3 495 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-217ENST00000537162 IGHV2OR16-5A0A0B4J2B6 119 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 ZNF816-ZNF321PA0A0X1KG74 233 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 GXYLT2A0PJZ3 443 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 FOXE1O00358 373 aaPredicted RBP8□□□□□ -1.13
CPSF7-217ENST00000537162 OIP5O43482 229 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 STK16O75716 305 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 KLK1P06870 262 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 SFTPBP07988 381 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 LYL1P12980 280 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 ZNF37AP17032 561 aaPredicted RBP8□□□□□ -1.13
CPSF7-217ENST00000537162 PTX3P26022 381 aaPredicted RBP8□□□□□ -1.13
CPSF7-217ENST00000537162 ELK4P28324 431 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 SERPINB1P30740 379 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 CD80P33681 288 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 GP5P40197 560 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 PIK3CBP42338 1070 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 ARFIP1P53367 373 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 SEC61A1P61619 476 aaKnown RBP8□□□□□ -1.13
CPSF7-217ENST00000537162 ZNF155Q12901 538 aaPredicted RBP8□□□□□ -1.13
CPSF7-217ENST00000537162 SNTB2Q13425 540 aaKnown RBP8□□□□□ -1.13
CPSF7-217ENST00000537162 HERPUD1Q15011 391 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 ALKBH6Q3KRA9 238 aa8□□□□□ -1.13
CPSF7-217ENST00000537162 TBRG1Q3YBR2 411 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms