RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 NEUROD4Q9HD90 331 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 FAM227AF5H4B4 570 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 RFXAPO00287 272 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 PPM1DO15297 605 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF749O43361 778 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 RENP00797 406 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ACP2P11117 423 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 CCL5P13501 91 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 RPA2P15927 270 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 CHATP28329 748 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ALDH3B1P43353 468 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 NDUFA6P56556 154 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 RAB41Q5JT25 222 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 LDLRAD1Q5T700 205 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 OR52N2Q8NGI0 321 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 C5orf34Q96MH7 638 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 BOCQ9BWV1 1114 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 FBRSQ9HAH7 460 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 KCNK12Q9HB15 430 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SDHAF3Q9NRP4 125 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SLC22A23A1A5C7 686 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 GRXCR1A8MXD5 290 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 RBMXL2O75526 392 aaKnown RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 CYB5AP00167 134 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 MMP3P08254 477 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 FOLR2P14207 255 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 CSNK2A2P19784 350 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 GZMMP51124 257 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 NRG3P56975 720 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 GPR17Q13304 367 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SLC9B2Q86UD5 537 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 CD200R1Q8TD46 325 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SFT2D1Q8WV19 159 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SLC25A36Q96CQ1 311 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ZIC5Q96T25 663 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 PBDC1Q9BVG4 233 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SMIM3Q9BZL3 60 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 TNFRSF12AQ9NP84 129 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 TREM2Q9NZC2 230 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SCML2Q9UQR0 700 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 DMRT1Q9Y5R6 373 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 CFAP20Q9Y6A4 193 aaKnown RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF646O15015 1829 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 A0A0B4J293 547 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 E2F3O00716 465 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 OR7A17O14581 309 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 TGOLN2O43493 480 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 OR2F2O95006 317 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 CSF1P09603 554 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 OR2F1Q13607 317 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF345Q14585 488 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 C14orf28Q4W4Y0 310 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SUSD1Q6UWL2 747 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 TEX19Q8NA77 164 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 RELL2Q8NC24 303 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF248Q8NDW4 579 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 OR4F15Q8NGB8 312 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 TM9SF4Q92544 642 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 EDAQ92838 391 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 RERGQ96A58 199 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SCGB3A2Q96PL1 93 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 OR2M4Q96R27 311 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 GMLQ99445 158 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 A0A0B4J2A0 478 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 DBX1A6NMT0 343 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 RNF13O43567 381 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 EIF1BO60739 113 aaKnown RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 POP7O75817 140 aaKnown RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 TPT1P13693 172 aaKnown RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 MAOAP21397 527 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 AK4P27144 223 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 EIF1P41567 113 aaKnown RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 PPT1P50897 306 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 CCR9P51686 369 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ACTC1P68032 377 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ACTA1P68133 377 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 PTPRRQ15256 657 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 UBXN11Q5T124 520 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 GLT8D1Q68CQ7 371 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 PAPD4Q6PIY7 484 aaKnown RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 MAMSTRQ6ZN01 415 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 C12orf40Q86WS4 652 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 OR4E2Q8NGC2 313 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 OR6N2Q8NGY6 317 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 JAM3Q9BX67 310 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 TMPRSS5Q9H3S3 457 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ACTL8Q9H568 366 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SMCO4Q9NRQ5 59 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SLC22A11Q9NSA0 550 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SHPKQ9UHJ6 478 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SNX11Q9Y5W9 270 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 TRBV23OR9-2A0A075B6M9 112 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 TRBV4-1A0A0J9YWV2 114 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SMIM35A0A1B0GVV1 85 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 LRIT2A6NDA9 550 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ERI3O43414 337 aaKnown RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 LILRB5O75023 590 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 NFATC1O95644 943 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SMPD1P17405 629 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 NDUFV2P19404 249 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms