RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CENPVL1A0A0U1RR11 272 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 TMEM247A6NEH6 219 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 CCT8L1PA6NM43 557 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 FCMRO60667 390 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 CRHP06850 196 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 CALB2P22676 271 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 P2RX1P51575 399 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 RPS3AP61247 264 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 HPCAP84074 193 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 MXRA7P84157 204 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 CTU2Q2VPK5 515 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 NDUFAF6Q330K2 333 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 ARHGAP11BQ3KRB8 267 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 OR2A2Q6IF42 318 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 VWA1Q6PCB0 445 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 TMEM200AQ86VY9 491 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 ZNF614Q8N883 585 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 ZNF350Q9GZX5 532 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 IKZF5Q9H5V7 419 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 RNF122Q9H9V4 155 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 P2RX2Q9UBL9 471 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 LIPT1Q9Y234 373 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 F8P00451 2351 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 PRR14LQ5THK1 2151 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 TEP1Q99973 2627 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 FAM221AA4D161 298 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 A8MXE2 369 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 EIF1AYO14602 144 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 OPN1LWP04000 364 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 IL11P20809 199 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 KIR2DL2P43627 348 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 RAC1P63000 192 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 SORDQ00796 357 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 FUT5Q11128 374 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 GPR68Q15743 365 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 PDZK1Q5T2W1 519 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 KIF18BQ86Y91 864 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 ZNF524Q96C55 264 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 STARD4Q96DR4 205 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 RBM24Q9BX46 236 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 PIGMQ9H3S5 423 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 TMEM185BQ9H7F4 350 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 NDE1Q9NXR1 346 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 GALNT8Q9NY28 637 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 STOML1Q9UBI4 398 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 PACSIN3Q9UKS6 424 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 MKLN1Q9UL63 735 aa16.04■□□□□ 0.16
TNFRSF1A-209ENST00000536717 TUBAL3A6NHL2 446 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 H3BNH8 94 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 EFNA2O43921 213 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 STX11O75558 287 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 CTAG2O75638 210 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 UGT2B17O75795 530 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 AQP8O94778 261 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 NR2F1P10589 423 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 BMP2P12643 396 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 SLC6A2P23975 617 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 EIF1AXP47813 144 aaKnown RBP16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 SUMO3P55854 103 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 EEF1A1P68104 462 aaKnown RBP16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 FOXF1Q12946 379 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 SELPLGQ14242 412 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 GNA13Q14344 377 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 GUSBP1Q15486 140 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 TOMM34Q15785 309 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 ZNF141Q15928 474 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 SGCBQ16585 318 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 GPAT3Q53EU6 434 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 RABL3Q5HYI8 236 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 GCNT6Q5T4J0 391 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 EEF1A1P5Q5VTE0 462 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 CNEP1R1Q8N9A8 125 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 OR10D3Q8NH80 312 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 LINC01560Q8TB33 94 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 FAM222BQ8WU58 562 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 ECSITQ9BQ95 431 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 KAT8Q9H7Z6 458 aaKnown RBP16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 AP3M1Q9Y2T2 418 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 MED13LQ71F56 2210 aa16.03■□□□□ 0.16
TNFRSF1A-209ENST00000536717 A0A0J9YW62 118 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PRAMEF27A3QJZ7 478 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SERINC4A6NH21 518 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 GTPBP1O00178 669 aaKnown RBP16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 MSTNO14793 375 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ADAMDEC1O15204 470 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 UBOX5O94941 541 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 NUDT14O95848 222 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 EIF1P41567 113 aaKnown RBP16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CYP51A1Q16850 503 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 AP1ARQ63HQ0 302 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 TYW3Q6IPR3 259 aaKnown RBP16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ESPNLQ6ZVH7 1005 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 BTLAQ7Z6A9 289 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CDH24Q86UP0 819 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 GPR119Q8TDV5 335 aa16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 TRNT1Q96Q11 434 aaKnown RBP16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 GPATCH1Q9BRR8 931 aaKnown RBP16.02■□□□□ 0.15
TNFRSF1A-209ENST00000536717 B2RBV5 119 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 TNFSF11O14788 317 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ZNF264O43296 627 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms