RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	ANGPTL2	Q9UKU9	493 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	HPCAL4	Q9UM19	191 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	SCML2	Q9UQR0	700 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	TIMM10B	Q9Y5J6	103 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	TRAV26-1	A0A087WT03	109 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	VSTM2B	A6NLU5	285 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710		K7ENP7	123 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	WWP2	O00308	870 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	CXCL11	O14625	94 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	CDX4	O14627	284 aa	Predicted RBP	4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	TAPBP	O15533	448 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	HCN1	O60741	890 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	OPN1MW	P04001	364 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	STS	P08842	583 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	OR8U8	P0C7N1	319 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	OPN1MW2	P0DN77	364 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	OPN1MW3	P0DN78	364 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	RNH1	P13489	461 aa	Known RBP	4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	ANXA13	P27216	316 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	GCA	P28676	217 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	LEP	P41159	167 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	TDO2	P48775	406 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	OC90	Q02509	493 aa	Predicted RBP	4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	ELAVL3	Q14576	367 aa	Known RBP	4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	CCDC137	Q6PK04	289 aa	Known RBP	4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	PAMR1	Q6UXH9	720 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	BAIAP2L2	Q6UXY1	529 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	FRA10AC1	Q70Z53	315 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	NLRP9	Q7RTR0	991 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	CCDC65	Q8IXS2	484 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	ZBED8	Q8IZ13	594 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	LYG1	Q8N1E2	194 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	ZNF525	Q8N782	197 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	OR5D13	Q8NGL4	314 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	OR13F1	Q8NGS4	319 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	HAVCR1	Q96D42	359 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	IL4I1	Q96RQ9	567 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	MCHR1	Q99705	422 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	KIR2DL4	Q99706	377 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	SLC35A5	Q9BS91	424 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	PAXX	Q9BUH6	204 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	POLE4	Q9NR33	117 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	SLC7A10	Q9NS82	523 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	SMOX	Q9NWM0	555 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	APOBEC3B	Q9UH17	382 aa	Known RBP	4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	KLHL21	Q9UJP4	597 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	RABL2B	Q9UNT1	228 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	RASD1	Q9Y272	281 aa		4.05	□□□□□ -1.76
PRKDC-208	ENST00000536710	PHOX2A	O14813	284 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	RGS16	O15492	202 aa	Predicted RBP	4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	TBL1X	O60907	577 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	NCK1	P16333	377 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	NMT1	P30419	496 aa	Known RBP	4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	RPL13A	P40429	203 aa	Known RBP	4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	GRIA1	P42261	906 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	CASP4	P49662	377 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	CEBPD	P49716	269 aa	Predicted RBP	4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	DAP3	P51398	398 aa	Known RBP	4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	P2RY4	P51582	365 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	TNFRSF17	Q02223	184 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	C1orf61	Q13536	156 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	SBK1	Q52WX2	424 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	ZNF677	Q86XU0	584 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	MRPS31	Q92665	395 aa	Known RBP	4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	FAF2	Q96CS3	445 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	SLC41A3	Q96GZ6	507 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	CCNL2	Q96S94	520 aa	Predicted RBP	4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	NIPSNAP3B	Q9BS92	247 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	ISG20L2	Q9H9L3	353 aa	Known RBP	4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	POPDC2	Q9HBU9	364 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710		Q9UF83	564 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	PHF11	Q9UIL8	331 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	VSIG4	Q9Y279	399 aa		4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	RRP15	Q9Y3B9	282 aa	Known RBP	4.04	□□□□□ -1.76
PRKDC-208	ENST00000536710	CLSPN	Q9HAW4	1339 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	OR10H3	O60404	316 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	B4GALT2	O60909	372 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	DIRAS1	O95057	198 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	GCFC2	P16383	781 aa	Known RBP	4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	NTS	P30990	170 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	MEOX2	P50222	304 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	PDZK1	Q5T2W1	519 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	OR4F3	Q6IEY1	312 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	CXCL17	Q6UXB2	119 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	DNM1P46	Q6ZS02	220 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	TRPM8	Q7Z2W7	1104 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	GPR137C	Q8N3F9	429 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	OR8J1	Q8NGP2	316 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	MRAP	Q8TCY5	172 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	PAQR8	Q8TEZ7	354 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	FGGY	Q96C11	551 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	COQ2	Q96H96	371 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710		Q9H3A6	140 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	SMYD3	Q9H7B4	428 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	NUDT15	Q9NV35	164 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	UBQLN1	Q9UMX0	589 aa	Known RBP	4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	POLDIP2	Q9Y2S7	368 aa		4.03	□□□□□ -1.76
PRKDC-208	ENST00000536710	ASB3	Q9Y575	518 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms