RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 KLHDC8BQ8IXV7 354 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 FAM26EQ8N5C1 309 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 EIF4E3Q8N5X7 224 aaKnown RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 C1orf127Q8N9H9 656 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 OR4F15Q8NGB8 312 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 GNPDA2Q8TDQ7 276 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 HIST1H2ACQ93077 130 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 SEC22AQ96IW7 307 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 CLUHP3Q96NS8 147 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 CAMK1GQ96NX5 476 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 NKX3-1Q99801 234 aaPredicted RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 LRFN3Q9BTN0 628 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 TMEM208Q9BTX3 173 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 DUSP16Q9BY84 665 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 DUSP15Q9H1R2 295 aaPredicted RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 HRH4Q9H3N8 390 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 TMPRSS5Q9H3S3 457 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 FKRPQ9H9S5 495 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 PIGVQ9NUD9 493 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 WWOXQ9NZC7 414 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 METTL1Q9UBP6 276 aaKnown RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 GRHPRQ9UBQ7 328 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 FZD10Q9ULW2 581 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 PPT2Q9UMR5 302 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 GOLT1BQ9Y3E0 138 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 PCDHB11Q9Y5F2 797 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 BACE2Q9Y5Z0 518 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 A0A1W2PPE2 198 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 ZC3H12DA2A288 527 aaKnown RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 TUBAL3A6NHL2 446 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 FAM183AA6NL82 134 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 RFPL4AA6NLU0 287 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 DRGXA6NNA5 263 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 RFPL4AL1F8VTS6 287 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 AP4M1O00189 453 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 CLDN5O00501 218 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 PCDH7O60245 1069 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 CILPO75339 1184 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 GCM2O75603 506 aaPredicted RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 DIRAS3O95661 229 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 TBX6O95947 436 aaPredicted RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 SFTPBP07988 381 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 MMP7P09237 267 aaPredicted RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 OR8G3PP0DMU2 310 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 UROSP10746 265 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 SLC2A1P11166 492 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 FABP4P15090 132 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 GNSP15586 552 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 ABOP16442 354 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 NME2P22392 152 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 MPGP29372 298 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 STAT5AP42229 794 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 RBM34P42696 430 aaKnown RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 CRATP43155 626 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 PITPNBP48739 271 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 CDC42P60953 191 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 RAC1P63000 192 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 DDX39BQ13838 428 aaKnown RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 ZNF750Q32MQ0 723 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 LINC00303Q3SY05 128 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 DCST1Q5T197 706 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 ARHGAP40Q5TG30 622 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 RTL6Q6ICC9 239 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 OR2A2Q6IF42 318 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 C11orf88Q6PI97 169 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 APOOLQ6UXV4 268 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 ZNF836Q6ZNA1 936 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 OLIG3Q7RTU3 272 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 TMEM200AQ86VY9 491 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 CALHM3Q86XJ0 350 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 SIDT2Q8NBJ9 832 aaKnown RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 OR13C4Q8NGS5 318 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 AP3S1Q92572 193 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 KIAA1143Q96AT1 154 aaPredicted RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 MVB12AQ96EY5 273 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 IGSF21Q96ID5 467 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 PPP3R2Q96LZ3 170 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 WFDC6Q9BQY6 131 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 ZNF559Q9BR84 538 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 C2orf88Q9BSF0 95 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 FSD1LQ9BXM9 530 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 SNHG12Q9BXW3 62 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 CHST6Q9GZX3 395 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 MAGIXQ9H6Y5 334 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 IL21RQ9HBE5 538 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 C1GALT1Q9NS00 363 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 CBLN4Q9NTU7 201 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 RASL12Q9NYN1 266 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 PPP4R1LQ9P1A2 415 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 PCTPQ9UKL6 214 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 FBXL3Q9UKT7 428 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 SAMD4AQ9UPU9 718 aaKnown RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 PPIAL4AQ9Y536 164 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 ARL5AQ9Y689 179 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 COLEC10Q9Y6Z7 277 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 WDR81Q562E7 1941 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 TRBV4-1A0A0J9YWV2 114 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 A0A1B0GV50 99 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 MED19A0JLT2 244 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms