RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 KIAA0355O15063 1070 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 FLRT2O43155 660 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 CREBL2O60519 120 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 GALTP07902 379 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 UBBP0CG47 229 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 UBCP0CG48 685 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 CYBAP13498 195 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 TIMP2P16035 220 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 ANXA7P20073 488 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 CSRP1P21291 193 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 PPP2R1BP30154 601 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 PRKAR1BP31321 381 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 AHRP35869 848 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 P2RX1P51575 399 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 ZNF136P52737 540 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 MAZP56270 477 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 OR12D2P58182 307 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 AP3S2P59780 193 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 ERVFC1P60507 584 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 GPR85P60893 370 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 RPS27AP62979 156 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 UBA52P62987 128 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 FKBP1BP68106 108 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 DCDP81605 110 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 MRPS10P82664 201 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 FOXK2Q01167 660 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 ELAVL2Q12926 359 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 MELKQ14680 651 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 CDK5R1Q15078 307 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 ZSWIM7Q19AV6 140 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 ZNF528Q3MIS6 628 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 ZNF311Q5JNZ3 666 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 PRAMEF14Q5SWL7 426 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 STPG1Q5TH74 334 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 PRPF38BQ5VTL8 546 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 PRAMEF13Q5VWM6 474 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 DHRS7BQ6IAN0 325 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 MRM1Q6IN84 353 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 MTFR2Q6P444 385 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 TMEM220Q6QAJ8 160 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 APOOLQ6UXV4 268 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 GDPD4Q6W3E5 623 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 C17orf107Q6ZR85 190 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 SSX6Q7RTT6 188 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 HMGN2P46Q86SG4 172 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 RNF180Q86T96 592 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 TMEM173Q86WV6 379 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 VRK2Q86Y07 508 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 NRMQ8IXM6 262 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 HS6ST3Q8IZP7 471 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 PXT1Q8NFP0 134 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 BPIFCQ8NFQ6 507 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 OR2AK2Q8NG84 335 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 FANK1Q8TC84 345 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 ASB13Q8WXK3 278 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 PHYHIPQ92561 330 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 KLK6Q92876 244 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 RNF166Q96A37 237 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 EXOSC8Q96B26 276 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 LRRC46Q96FV0 321 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 SLC41A3Q96GZ6 507 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 C4orf36Q96KX1 117 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 ART5Q96L15 291 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 LINC00615Q96LM1 132 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 TEAD3Q99594 435 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 TEX12Q9BXU0 123 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 PBX4Q9BYU1 374 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 NKX6-2Q9C056 277 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 FAM117AQ9C073 453 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 ZDHHC5Q9C0B5 715 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 OR52D1Q9H346 318 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 C1orf198Q9H425 327 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 IL21Q9HBE4 155 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 ZNF334Q9HCZ1 680 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 NRIP3Q9NQ35 241 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 EQTNQ9NQ60 294 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 CMC2Q9NRP2 79 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 ZCCHC3Q9NUD5 404 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 MRPL15Q9P015 296 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 AKAP7Q9P0M2 348 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 C5AR2Q9P296 337 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 KLHL9Q9P2J3 617 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 HCSTQ9UBK5 93 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 TRPC4Q9UBN4 977 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 NOSIPQ9Y314 301 aaKnown RBP6.41□□□□□ -1.38
CPSF7-215ENST00000536145 YIPF1Q9Y548 306 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 CKAP5Q14008 2032 aa6.41□□□□□ -1.38
CPSF7-215ENST00000536145 MTCL1Q9Y4B5 1905 aaKnown RBP6.4□□□□□ -1.38
CPSF7-215ENST00000536145 PLXND1Q9Y4D7 1925 aa6.4□□□□□ -1.38
CPSF7-215ENST00000536145 TMEM272A0A1B0GTI8 110 aa6.4□□□□□ -1.38
CPSF7-215ENST00000536145 SLC22A31A6NKX4 558 aa6.4□□□□□ -1.38
CPSF7-215ENST00000536145 RFPL4AA6NLU0 287 aa6.4□□□□□ -1.38
CPSF7-215ENST00000536145 F5H5P2 479 aa6.4□□□□□ -1.38
CPSF7-215ENST00000536145 RFPL4AL1F8VTS6 287 aa6.4□□□□□ -1.38
CPSF7-215ENST00000536145 TEX46H3BTG2 121 aa6.4□□□□□ -1.38
CPSF7-215ENST00000536145 PYCARD-AS1I3L0S3 204 aa6.4□□□□□ -1.38
CPSF7-215ENST00000536145 MID1O15344 667 aa6.4□□□□□ -1.38
CPSF7-215ENST00000536145 SIGLEC5O15389 551 aa6.4□□□□□ -1.38
CPSF7-215ENST00000536145 ARPC5O15511 151 aa6.4□□□□□ -1.38
CPSF7-215ENST00000536145 NDUFS4O43181 175 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms