RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CBFBQ13951 182 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 VEZF1Q14119 521 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 PPA1Q15181 289 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 TOMM34Q15785 309 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 FAM153CQ494X1 144 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 C6orf136Q5SQH8 315 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 AGAP6Q5VW22 663 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 FBXW9Q5XUX1 488 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 ANKRD26P1Q6NSI1 321 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 ZNF544Q6NX49 715 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 GALNT5Q7Z7M9 940 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 LRRC34Q8IZ02 419 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 CEP112Q8N8E3 955 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 ADAMTS15Q8TE58 950 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 TMEM158Q8WZ71 300 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 PMM1Q92871 262 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 CDS1Q92903 461 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 MUCL1Q96DR8 90 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 SH3YL1Q96HL8 342 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 C16orf45Q96MC5 204 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 PRPF18Q99633 342 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 ZNF350Q9GZX5 532 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 C12orf49Q9H741 205 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 TMEM185BQ9H7F4 350 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 EXOSC3Q9NQT5 275 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 ACER3Q9NUN7 267 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 KCNE5Q9UJ90 142 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 CDC42EP3Q9UKI2 254 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 TRAPPC4Q9Y296 219 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 CARD8Q9Y2G2 431 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 PTGDR2Q9Y5Y4 395 aa9.9□□□□□ -0.82
CLSTN3-206ENST00000535668 UQCRHLA0A096LP55 91 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 SERINC4A6NH21 518 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 A8MV72 311 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 FAAHO00519 579 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 COPEO14579 308 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 GPR171O14626 319 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 ANKRD28O15084 1053 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 AKAP10O43572 662 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 SCN2BO60939 215 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 H6PDO95479 791 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 PMS2P2O95744 297 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 OPN1LWP04000 364 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 TP53P04637 393 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 SLC25A16P16260 332 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 KRT4P19013 534 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 GGT1P19440 569 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 IGHV1-2P23083 117 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 SFTPDP35247 375 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 APOBEC1P41238 236 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 RPL38P63173 70 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 CSNK2A1P68400 391 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 RASGEF1BQ0VAM2 473 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 ARHGAP11BQ3KRB8 267 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 TIGD2Q4W5G0 525 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 CCNJQ5T5M9 372 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 OR7E24Q6IFN5 339 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 TMEM108Q6UXF1 575 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 C10orf107Q8IVU9 208 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 C17orf78Q8N4C9 275 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 GATSQ8NAP1 163 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 C1orf162Q8NEQ5 155 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 KBTBD8Q8NFY9 601 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 OR8J2Q8NGG1 315 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 TWIST2Q8WVJ9 160 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 TMEM234Q8WY98 164 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 PROX1Q92786 737 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 TNFRSF13CQ96RJ3 184 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 DHRS9Q9BPW9 319 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 CCDC106Q9BWC9 280 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 EML4Q9HC35 981 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 CBLN4Q9NTU7 201 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 NPAP1Q9NZP6 1156 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 EMC3Q9P0I2 261 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 TBK1Q9UHD2 729 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 FAF1Q9UNN5 650 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 B3GALT5Q9Y2C3 310 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 HDGFL3Q9Y3E1 203 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 SLC25A15Q9Y619 301 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 KCNE3Q9Y6H6 103 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 MALRD1Q5VYJ5 2156 aa9.89□□□□□ -0.83
CLSTN3-206ENST00000535668 HEATR1Q9H583 2144 aaKnown RBP9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 RNASET2O00584 256 aaKnown RBP9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 CLOCKO15516 846 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 RAMP1O60894 148 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 ADAM11O75078 769 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 STX11O75558 287 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 UGT2B17O75795 530 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 AGR2O95994 175 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 CSF3P09919 207 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 LINC00032P0C843 101 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 UBL4AP11441 157 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 EDNRAP25101 427 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 SLC7A1P30825 629 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 PGM1P36871 562 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 DIO1P49895 249 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 CLDN8P56748 225 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 SESN3P58005 492 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 HBA1P69905 142 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 TXNL4AP83876 142 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms