RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 SLC48A1Q6P1K1 146 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 DGAT2L6Q6ZPD8 337 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 GLRX5Q86SX6 157 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 OR2L3Q8NG85 312 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 OR5M3Q8NGP4 307 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 RASSF5Q8WWW0 418 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 SMPDL3BQ92485 455 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 CNOT9Q92600 299 aaKnown RBP12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 GON7Q9BXV9 100 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 MEPEQ9NQ76 525 aaPredicted RBP12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 PRSS16Q9NQE7 514 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 KLHL28Q9NXS3 571 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 PCDHGB7Q9Y5F8 929 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 SPAG17Q6Q759 2223 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 PRR23D1E9PI22 279 aaPredicted RBP12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 EMC8O43402 210 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 ALDOBP05062 364 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 PRR23D2P0DMB1 279 aaPredicted RBP12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 ATF4P18848 351 aaPredicted RBP12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 POLR2CP19387 275 aaPredicted RBP12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 GSTM3P21266 225 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 STOMP27105 288 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 PER3P56645 1201 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 ZNF85Q03923 595 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 ELAVL3Q14576 367 aaKnown RBP12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 KIAA1211LQ6NV74 962 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 CD200R1LQ6Q8B3 271 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 COMMD7Q86VX2 200 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 FTMTQ8N4E7 242 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 OSTF1Q92882 214 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 KISS1RQ969F8 398 aaPredicted RBP12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 RFKQ969G6 155 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 GIMAP5Q96F15 307 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 LRIG1Q96JA1 1093 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 PRSS27Q9BQR3 290 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 CA10Q9NS85 328 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 ACSS1Q9NUB1 689 aaPredicted RBP12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 KLHL21Q9UJP4 597 aa12.87□□□□□ -0.35
LPCAT3-203ENST00000535479 A0A0G2JPF8 293 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 LOC105371267A0A1B0GV96 52 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 ABHD14A-ACY1A0A1B0GW23 586 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 POM121BA6NF01 834 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 SNTNA6NMZ2 147 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 HNRNPCL2B2RXH8 293 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 HNRNPCL3B7ZW38 293 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 SLC43A1O75387 559 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 CT62P0C5K7 136 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 HNRNPCL4P0DMR1 293 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 FRKP42685 505 aaPredicted RBP12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 ZNF136P52737 540 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 FAM53BQ14153 422 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 FAM78AQ5JUQ0 283 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 FAAH2Q6GMR7 532 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 TEX261Q6UWH6 196 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 VITQ6UXI7 678 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 RNF44Q7L0R7 432 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 CDH24Q86UP0 819 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 PAWRQ96IZ0 340 aaKnown RBP12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 ULBP3Q9BZM4 244 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 IGFLR1Q9H665 355 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 TRPV4Q9HBA0 871 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 IL20Q9NYY1 176 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 GLTPQ9NZD2 209 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 DKK3Q9UBP4 350 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 U3KQ87 197 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 HEATR5AQ86XA9 2040 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 SLC22A5O76082 557 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 TFP02787 698 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 CCL5P13501 91 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 PRKACBP22694 351 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 DNASE1P24855 282 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 GABRA3P34903 492 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 RAB28P51157 221 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 ZP1P60852 638 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 TNK1Q13470 666 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 RUNX2Q13950 521 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 SLC44A3Q8N4M1 653 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 PMEPA1Q969W9 287 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 BPIFA2Q96DR5 249 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 CD180Q99467 661 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 WASH6PQ9NQA3 447 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 TBC1D29Q9UFV1 150 aa12.86□□□□□ -0.35
LPCAT3-203ENST00000535479 A0A0G2JK05 382 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 TSPAN11A1L157 253 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 CTSVO60911 334 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 RAD52P43351 418 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 EMDP50402 254 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 ZBTB37Q5TC79 503 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 MBOAT2Q6ZWT7 520 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 MEPCEQ7L2J0 689 aaKnown RBP12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 NRSN1Q8IZ57 195 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 OR52L1Q8NGH7 329 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 TMEM239Q8WW34 195 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 YIPF5Q969M3 257 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 ERMAPQ96PL5 475 aaPredicted RBP12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 FGF22Q9HCT0 170 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 CYSLTR2Q9NS75 346 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 CES1P1Q9UKY3 287 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms