RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 PLEKHM3Q6ZWE6 761 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 C16orf62Q7Z3J2 963 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 CXorf67Q86X51 503 aaPredicted RBP8.57□□□□□ -1.04
SSBP3-215ENST00000533946 ADGRG3Q86Y34 549 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 CCDC103Q8IW40 242 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 CLIP4Q8N3C7 705 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 RAB3IL1Q8TBN0 382 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 ZFP90Q8TF47 636 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 MAL2Q969L2 176 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 PIK3IP1Q96FE7 263 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 ZFP3Q96NJ6 502 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 PANX1Q96RD7 426 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 PRRG4Q9BZD6 226 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 NMUR2Q9GZQ4 415 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 LAT2Q9GZY6 243 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 PAIP1Q9H074 479 aaKnown RBP8.57□□□□□ -1.04
SSBP3-215ENST00000533946 PIGMQ9H3S5 423 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 PLSCR4Q9NRQ2 329 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 SLC25A37Q9NYZ2 338 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 KLHL13Q9P2N7 655 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 PROCRQ9UNN8 238 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 WDR45Q9Y484 360 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 USH1CQ9Y6N9 552 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 ETV2O00321 342 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-215ENST00000533946 SLC22A3O75751 556 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 CD8BP10966 210 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 KCNJ5P48544 419 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 SLC18A1P54219 525 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 RPS3AP61247 264 aaKnown RBP8.56□□□□□ -1.04
SSBP3-215ENST00000533946 ADAM8P78325 824 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 MERTKQ12866 999 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 FOXD4Q12950 439 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-215ENST00000533946 BNIP2Q12982 314 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 SF3B4Q15427 424 aaKnown RBP eCLIP8.56□□□□□ -1.041e-6■■■■□ 24.4
SSBP3-215ENST00000533946 PDCD4Q53EL6 469 aaKnown RBP8.56□□□□□ -1.04
SSBP3-215ENST00000533946 AGBL2Q5U5Z8 902 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 ANXA8L1Q5VT79 327 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 PAMR1Q6UXH9 720 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 ESPNLQ6ZVH7 1005 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 Q71RC1 249 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-215ENST00000533946 SPATA19Q7Z5L4 167 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 MTERF4Q7Z6M4 381 aaKnown RBP8.56□□□□□ -1.04
SSBP3-215ENST00000533946 KIF18BQ86Y91 864 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 CIARTQ8N365 385 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-215ENST00000533946 LILRB1Q8NHL6 650 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-215ENST00000533946 RNF128Q8TEB7 428 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 GTF2H4Q92759 462 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 MOAP1Q96BY2 351 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 DACH2Q96NX9 599 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 OR5B2Q96R09 309 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 TMUB1Q9BVT8 246 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 CCDC106Q9BWC9 280 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 HOXD1Q9GZZ0 328 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 CXXC4Q9H2H0 198 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 SDR39U1Q9NRG7 319 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-215ENST00000533946 PCDHB14Q9Y5E9 798 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 TLN2Q9Y4G6 2542 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 ALPK2Q86TB3 2170 aa8.56□□□□□ -1.04
SSBP3-215ENST00000533946 TMEM72A0PK05 275 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 C16orf97H3BN30 126 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 LINC01387J3KSC0 135 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 EIF4E2O60573 245 aaKnown RBP8.55□□□□□ -1.04
SSBP3-215ENST00000533946 SYNGR4O95473 234 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 CRHP06850 196 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 FESP07332 822 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 TFPTP0C1Z6 253 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 IMPDH2P12268 514 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 PTNP21246 168 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 RPS4Y1P22090 263 aaKnown RBP8.55□□□□□ -1.04
SSBP3-215ENST00000533946 CRYGSP22914 178 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 LCN1P31025 176 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 ACAA2P42765 397 aaKnown RBP8.55□□□□□ -1.04
SSBP3-215ENST00000533946 IDH2P48735 452 aaKnown RBP8.55□□□□□ -1.04
SSBP3-215ENST00000533946 KHKP50053 298 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 POLR2JP52435 117 aaKnown RBP8.55□□□□□ -1.04
SSBP3-215ENST00000533946 CLNS1AP54105 237 aaKnown RBP8.55□□□□□ -1.04
SSBP3-215ENST00000533946 EEFSECP57772 596 aaKnown RBP8.55□□□□□ -1.04
SSBP3-215ENST00000533946 KCNJ10P78508 379 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 LGALS3BPQ08380 585 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 SELPLGQ14242 412 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 GLIPR1L2Q4G1C9 344 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 FBXW10Q5XX13 1052 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 AP1ARQ63HQ0 302 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 OR2A2Q6IF42 318 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 TFAP2EQ6VUC0 442 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 ZNF836Q6ZNA1 936 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 FCRLAQ7L513 359 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 WFDC8Q8IUA0 241 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 MISPQ8IVT2 679 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 WDFY1Q8IWB7 410 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 GABRG1Q8N1C3 465 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 OR6K3Q8NGY3 331 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 PIWIL2Q8TC59 973 aaKnown RBP8.55□□□□□ -1.04
SSBP3-215ENST00000533946 SLC38A5Q8WUX1 472 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 S100PBPQ96BU1 408 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 GMPPAQ96IJ6 420 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-215ENST00000533946 MRGPRX4Q96LA9 322 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 ATP6V1G3Q96LB4 118 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 PSD2Q9BQI7 771 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 MED18Q9BUE0 208 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms