RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 GGNQ86UU5 652 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 COMTD1Q86VU5 262 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 SLC30A8Q8IWU4 369 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 UBQLNLQ8IYU4 475 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 ITLN2Q8WWU7 325 aaPredicted RBP10.8□□□□□ -0.68
SSBP3-214ENST00000533209 SMPDL3BQ92485 455 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 REXO5Q96IC2 774 aaKnown RBP10.8□□□□□ -0.68
SSBP3-214ENST00000533209 TRIB1Q96RU8 372 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 SPATA5L1Q9BVQ7 753 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 ARMC7Q9H6L4 198 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 GMPR2Q9P2T1 348 aaKnown RBP10.8□□□□□ -0.68
SSBP3-214ENST00000533209 TAGLN3Q9UI15 199 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 SPTAN1Q13813 2472 aaKnown RBP10.8□□□□□ -0.68
SSBP3-214ENST00000533209 A0A0J9YW62 118 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 PRORSD1PA6NEY8 169 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 CD8B2A6NJW9 211 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 CLCA1A8K7I4 914 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 FAM220BPB1ANY3 271 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 M0QX08 132 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 NME4O00746 187 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 NDUFAB1O14561 156 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 SERPINB7O75635 380 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 TOXO94900 526 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 MFN2O95140 757 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 OPN1LWP04000 364 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 GP1BBP13224 206 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 SHC1P29353 583 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 IDH2P48735 452 aaKnown RBP10.79□□□□□ -0.68
SSBP3-214ENST00000533209 SLC7A2P52569 658 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 SMSP52788 366 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 CRYBA2P53672 197 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 VEZF1Q14119 521 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 KRT72Q14CN4 511 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 SF3B4Q15427 424 aaKnown RBP eCLIP10.79□□□□□ -0.682e-6■■■□□ 18.7
SSBP3-214ENST00000533209 CTU2Q2VPK5 515 aaKnown RBP10.79□□□□□ -0.68
SSBP3-214ENST00000533209 GLIPR1L2Q4G1C9 344 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 INTS11Q5TA45 600 aaKnown RBP10.79□□□□□ -0.68
SSBP3-214ENST00000533209 ERICH5Q6P6B1 374 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 PLXDC2Q6UX71 529 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 PLEKHM3Q6ZWE6 761 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 CCDC80Q76M96 950 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 PATL1Q86TB9 770 aaKnown RBP10.79□□□□□ -0.68
SSBP3-214ENST00000533209 ARMC8Q8IUR7 673 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 LACC1Q8IV20 430 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 LILRA2Q8N149 483 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 MEIOBQ8N635 442 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 ZNF563Q8TA94 476 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 BCAS4Q8TDM0 211 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 TMEM234Q8WY98 164 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 RND1Q92730 232 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 SLC35B4Q969S0 331 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 ADGRG7Q96K78 797 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 UCN2Q96RP3 112 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 TMEM185BQ9H7F4 350 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 CALHM2Q9HA72 323 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 CLCF1Q9UBD9 225 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 STOML1Q9UBI4 398 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 AP3M1Q9Y2T2 418 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 HEATR5AQ86XA9 2040 aa10.79□□□□□ -0.68
SSBP3-214ENST00000533209 MBD3L4A6NDZ8 208 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-214ENST00000533209 MBD3L3A6NE82 208 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-214ENST00000533209 MBD3L5A6NJ08 208 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-214ENST00000533209 EIF1AYO14602 144 aaKnown RBP10.78□□□□□ -0.68
SSBP3-214ENST00000533209 ADAMDEC1O15204 470 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 FRS3O43559 492 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 OPN1SWP03999 348 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 AGAP20933 346 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 ME2P23368 584 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 CEACAM8P31997 349 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-214ENST00000533209 SFTPDP35247 375 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 SLC1A3P43003 542 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 ZNF136P52737 540 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 EEFSECP57772 596 aaKnown RBP10.78□□□□□ -0.68
SSBP3-214ENST00000533209 PSME3P61289 254 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 HOXC5Q00444 222 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 LIPEQ05469 1076 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 MERTKQ12866 999 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 SELENBP1Q13228 472 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 CDSNQ15517 529 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 DUSP7Q16829 419 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 RIPPLY2Q5TAB7 128 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 XKRXQ6PP77 449 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 ZNF550Q7Z398 422 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 MRGPRGQ86SM5 289 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 CCDC71Q8IV32 467 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-214ENST00000533209 MICU2Q8IYU8 434 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 ZNF808Q8N4W9 903 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-214ENST00000533209 SMYD1Q8NB12 490 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 TNIP2Q8NFZ5 429 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 OR2T12Q8NG77 320 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 GPR32P1Q8NGA4 272 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 MBD3L2Q8NHZ7 208 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-214ENST00000533209 TAMM41Q96BW9 452 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 KLHL15Q96M94 604 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 WFDC6Q9BQY6 131 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 PINK1Q9BXM7 581 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 CTPS2Q9NRF8 586 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 ABCD2Q9UBJ2 740 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 PRDM4Q9UKN5 801 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 RNF6Q9Y252 685 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms