RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 HSPE1-MOB4S4R3N1 261 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 AP4M1O00189 453 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 CH25HO95992 272 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 TTRP02766 147 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 OPN1SWP03999 348 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 SPP1P10451 314 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 NPRL3Q12980 569 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 PCLAFQ15004 111 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 LY6G5CQ5SRR4 150 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 PAQR3Q6TCH7 311 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 LRP11Q86VZ4 500 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 C12orf76Q8N812 135 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 BPIFCQ8NFQ6 507 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 STEAP2Q8NFT2 490 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 INTS14Q96SY0 518 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 RNF39Q9H2S5 420 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 WRAP73Q9P2S5 460 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 LSM5Q9Y4Y9 91 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 PCDHGA2Q9Y5H1 932 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 PRSS47A8MTI9 375 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 GABRDO14764 452 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 GBAP04062 536 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 F3P13726 295 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 USF1P22415 310 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 PLP2Q04941 152 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 ADPRMQ3LIE5 342 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 CARD17Q5XLA6 110 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 TOMM20LQ6UXN7 152 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 WDR88Q6ZMY6 472 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 ZNF584Q8IVC4 421 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 FBXL18Q96ME1 805 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 METTL9Q9H1A3 318 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 NKX2-4Q9H2Z4 354 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 ACOXLQ9NUZ1 547 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 HRASLS2Q9NWW9 162 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 VNN3Q9NY84 501 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 LUZP4Q9P127 313 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 DCTN6O00399 190 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 SOX1O00570 391 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 KCNE1P15382 129 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 NHLH2Q02577 135 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 C1orf61Q13536 156 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 PCGF3Q3KNV8 242 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 SPIN4Q56A73 249 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 DMRTA1Q5VZB9 504 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 C22orf39Q6P5X5 142 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 SUSD1Q6UWL2 747 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 L3MBTL4Q8NA19 623 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 GATSQ8NAP1 163 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 WDR20Q8TBZ3 569 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 CREB3L4Q8TEY5 395 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 SORCS1Q8WY21 1168 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 RAB7BQ96AH8 199 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 ECHDC3Q96DC8 303 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 LRR1Q96L50 414 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 EFCAB11Q9BUY7 163 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 ACOT13Q9NPJ3 140 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 DTLQ9NZJ0 730 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 GRHPRQ9UBQ7 328 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 RNF11Q9Y3C5 154 aa6.56□□□□□ -1.36
TGFBR3-210ENST00000533089 CXorf65A6NEN9 183 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 PMM2O15305 246 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 ECI2O75521 394 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 SOX9P48436 509 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 GPR143P51810 404 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 VHLLQ6RSH7 139 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 DNAJC22Q8N4W6 341 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 TRAM1L1Q8N609 369 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 ZNF610Q8N9Z0 462 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 PHYHIPQ92561 330 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 FOXRED1Q96CU9 486 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 TOX2Q96NM4 488 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 ZIC5Q96T25 663 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 TTTY10Q9BZA0 68 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 CNTN6Q9UQ52 1028 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 ADAMTS3O15072 1205 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 AMY2AP04746 511 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 HAPLN1P10915 354 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 FBLP22087 321 aaKnown RBP6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 SDHAP31040 664 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 SHMT2P34897 504 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 SPCS3P61009 180 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 MBTPS1Q14703 1052 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 TOMM34Q15785 309 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 GTDC1Q4AE62 458 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 TMEM205Q6UW68 189 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 ZNF783Q6ZMS7 281 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 TMPPEQ6ZT21 453 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 OR8D4Q8NGM9 314 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 PCYT2Q99447 389 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 TSPAN10Q9H1Z9 355 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 SPACA1Q9HBV2 294 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 IGKV6D-21A0A0A0MT36 114 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 C17orf113A0A1B0GUU1 675 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 TSPAN11A1L157 253 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 MYADML2A6NDP7 307 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 NAP1L6A6NFF2 107 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 ZNF860A6NHJ4 632 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 METTL15A6NJ78 407 aa6.55□□□□□ -1.36
TGFBR3-210ENST00000533089 ZNF670-ZNF695F2Z2N8 137 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms