RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PRR14Q9BWN1 585 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 SLC6A15Q9H2J7 730 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 CUTCQ9NTM9 273 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 SLC6A5Q9Y345 797 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 TEX13DA0A0J9YY54 714 aaPredicted RBP14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 TVP23AA6NH52 213 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 LGI1O95970 557 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 SLC35E2P0CK97 266 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 OR1D4P47884 311 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 FXYD6P3P58550 94 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 GLO1Q04760 184 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 THOC7Q6I9Y2 204 aaKnown RBP14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 SHISA6Q6ZSJ9 500 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 KCTD9Q7L273 389 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 GDF7Q7Z4P5 450 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 OR51Q1Q8NH59 317 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 ELP5Q8TE02 316 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 WASH6PQ9NQA3 447 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 SPHK1Q9NYA1 384 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 C14orf166Q9Y224 244 aaKnown RBP14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 ACTBP60709 375 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 DCAF7P61962 342 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 ACTG1P63261 375 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 CBFBQ13951 182 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 GPR139Q6DWJ6 353 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 B3GLCTQ6Y288 498 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 KLHDC8BQ8IXV7 354 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 HYLS1Q96M11 299 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 VN1R3Q9BXE9 311 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 INIPQ9NRY2 104 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 RDH8Q9NYR8 311 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 FBXO9Q9UK97 447 aaPredicted RBP14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 H3BML4 177 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 GRK5P34947 590 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 TPMTP51580 245 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 EFR3AQ14156 821 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 AGAP6Q5VW22 663 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 TMEM179BQ7Z7N9 219 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 LRRC28Q86X40 367 aaPredicted RBP14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 NAXEQ8NCW5 288 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 AGAP4Q96P64 663 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 NAA11Q9BSU3 229 aaPredicted RBP14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 GABARAPL3Q9BY60 117 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 MED20Q9H944 212 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 MEPEQ9NQ76 525 aaPredicted RBP14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 VDAC3Q9Y277 283 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 MED16Q9Y2X0 877 aa14.26□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF43P17038 809 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 MANEAQ5SRI9 462 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 UBE2UQ5VVX9 321 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 BCDIN3DQ7Z5W3 292 aaKnown RBP14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 SLC37A2Q8TED4 501 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 THAP7Q9BT49 309 aaPredicted RBP14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 SEMA6CQ9H3T2 930 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 TXNL4BQ9NX01 149 aaKnown RBP14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 DAPP1Q9UN19 280 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 HS3ST3A1Q9Y663 406 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 A3GALT2U3KPV4 340 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 TRAV18A0A075B6X5 111 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 A0A1B0GWA3 101 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 A6NIZ1 184 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF264O43296 627 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 AQP9O43315 295 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 CCNOP22674 350 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 SLC19A1P41440 591 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 CXCL12P48061 93 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 PRKXP51817 358 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 RAP1BP61224 184 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 RAP1AP62834 184 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 TPRA1Q86W33 373 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 UEVLDQ8IX04 471 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 CLDN22Q8N7P3 220 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 SPERTQ8NA61 448 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 HMGCLL1Q8TB92 370 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 TMEM255BQ8WV15 326 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 TNFRSF13CQ96RJ3 184 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 NTN4Q9HB63 628 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 PLCXD1Q9NUJ7 323 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 CACNA1CQ13936 2221 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 CSO75390 466 aaKnown RBP14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 CD160O95971 181 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 FBXO45P0C2W1 286 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 BSGP35613 385 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 GP2P55259 537 aaKnown RBP14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 RPS25P62851 125 aaKnown RBP14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 KIAA1211LQ6NV74 962 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 P4HA3Q7Z4N8 544 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF717Q9BY31 904 aaPredicted RBP14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 SLC25A18Q9H1K4 315 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 MEIOCA2RUB1 952 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 GPRIN2O60269 458 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 LCMT2O60294 686 aaKnown RBP14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 PRH1P02810 166 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 GLP1RP43220 463 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 LIM2P55344 173 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 ATXN7L3Q14CW9 347 aaPredicted RBP14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 OCLNQ16625 522 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 RNASE10Q5GAN6 216 aaKnown RBP14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 CALHM3Q86XJ0 350 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF615Q8N8J6 731 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms