RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 GCNT6Q5T4J0 391 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 RNF220Q5VTB9 566 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 REP15Q6BDI9 236 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 COMTD1Q86VU5 262 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 PEX5LQ8IYB4 626 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 LILRA2Q8N149 483 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 MEIOBQ8N635 442 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 NFKBIDQ8NI38 313 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 CA5BP1Q8WTZ4 195 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 LRRC58Q96CX6 371 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 SLC39A3Q9BRY0 314 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 TMEM185BQ9H7F4 350 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 ZNF629Q9UEG4 869 aaPredicted RBP12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 ZNF443Q9Y2A4 671 aaPredicted RBP12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 MPDZO75970 2070 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 FAAHO00519 579 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 SEC14L5O43304 696 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 TPST1O60507 370 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 IL18BPO95998 194 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 NPPAP01160 153 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 IL2RAP01589 272 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 PRG2P13727 222 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 IGFBP2P18065 325 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 PGCP20142 388 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 RYKP34925 604 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 SLC6A8P48029 635 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 CCR4P51679 360 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 PCBP3P57721 371 aaKnown RBP12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 EEFSECP57772 596 aaKnown RBP12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 GNGT1P63211 74 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 EPS8Q12929 822 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 GNA13Q14344 377 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 GUSBP1Q15486 140 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 REEP3Q6NUK4 255 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 ESPNLQ6ZVH7 1005 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 PLEKHM3Q6ZWE6 761 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 MTDHQ86UE4 582 aaKnown RBP12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 CALHM3Q86XJ0 350 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 ADGRG3Q86Y34 549 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 TMCO5AQ8N6Q1 288 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 OR10D3Q8NH80 312 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 BBS10Q8TAM1 723 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 FNDC9Q8TBE3 224 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 SMPDL3BQ92485 455 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 TM9SF2Q99805 663 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 SPATA9Q9BWV2 254 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 PINK1Q9BXM7 581 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 ADAM19Q9H013 955 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 ENKD1Q9H0I2 346 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 COQ10BQ9H8M1 238 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 RNF122Q9H9V4 155 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 JKAMPQ9P055 326 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 CORO2BQ9UQ03 480 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 ZNF175Q9Y473 711 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 CAPN7Q9Y6W3 813 aa12.51□□□□□ -0.41
TSPAN4-220ENST00000532375 SLC22A20A6NK97 555 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 BBIP1A8MTZ0 92 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 EIF1AYO14602 144 aaKnown RBP12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 MRASO14807 208 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 CXCL13O43927 109 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 CCDC22O60826 627 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 TNFSF13O75888 250 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 AQP8O94778 261 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 PABPC4LP0CB38 370 aaKnown RBP12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 GKN3PP0CG01 181 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 SLC6A2P23975 617 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 CTSSP25774 331 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 IDH2P48735 452 aaKnown RBP12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 CYLC2Q14093 348 aaPredicted RBP12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 SCARB2Q14108 478 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 MAPRE2Q15555 327 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 GLIPR1L2Q4G1C9 344 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 LIN52Q52LA3 116 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 RABL3Q5HYI8 236 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 ZNF787Q6DD87 383 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 C8orf82Q6P1X6 216 aaPredicted RBP12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 SERPINA11Q86U17 422 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 ZZZ3Q8IYH5 903 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 POU5F2Q8N7G0 328 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 OR2V1Q8NHB1 315 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 RP9Q8TA86 221 aaKnown RBP12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 KLHL15Q96M94 604 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 ZFP3Q96NJ6 502 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 WFDC6Q9BQY6 131 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 GPATCH1Q9BRR8 931 aaKnown RBP12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 KCNJ16Q9NPI9 418 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 IFT52Q9Y366 437 aa12.5□□□□□ -0.41
TSPAN4-220ENST00000532375 FREM1Q5H8C1 2179 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 CFAP73A6NFT4 308 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 FAM90A27PA6NNH2 459 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 TNFSF11O14788 317 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 MFN2O95140 757 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 TMIGD3P0DMS9 266 aaPredicted RBP12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 COX4I1P13073 169 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 SFTPDP35247 375 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 KIR2DL2P43627 348 aaPredicted RBP12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 EIF1AXP47813 144 aaKnown RBP12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 AGFG1P52594 562 aaKnown RBP12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 CRYBA2P53672 197 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms