RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 TOR1AIP2Q8NFQ8 470 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 FAM76AQ8TAV0 307 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 DCAKDQ8WVC6 231 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 APH1AQ96BI3 265 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 MRGPRX4Q96LA9 322 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 MS4A4EQ96PG1 132 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 THUMPD3Q9BV44 507 aaKnown RBP8.12□□□□□ -1.11
NEDD8-206ENST00000531430 HOXD1Q9GZZ0 328 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 CDC42EP4Q9H3Q1 356 aaKnown RBP8.12□□□□□ -1.11
NEDD8-206ENST00000531430 REEP4Q9H6H4 257 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 BCO1Q9HAY6 547 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 ASB6Q9NWX5 421 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 SIRT5Q9NXA8 310 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 EMC3Q9P0I2 261 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 UPB1Q9UBR1 384 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 ING1Q9UK53 422 aaPredicted RBP8.12□□□□□ -1.11
NEDD8-206ENST00000531430 FAF1Q9UNN5 650 aaPredicted RBP8.12□□□□□ -1.11
NEDD8-206ENST00000531430 SLC25A15Q9Y619 301 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 FKBP7Q9Y680 259 aa8.12□□□□□ -1.11
NEDD8-206ENST00000531430 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 LRP5LA4QPB2 252 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 ZNF724A8MTY0 619 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 KIF2AO00139 706 aaPredicted RBP8.11□□□□□ -1.11
NEDD8-206ENST00000531430 KLF11O14901 512 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 ZNF264O43296 627 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 ITGA2P17301 1181 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 LCN1P31025 176 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 MAP3K8P41279 467 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 DIO1P49895 249 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 ATP12AP54707 1039 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 FOXG1P55316 489 aaPredicted RBP8.11□□□□□ -1.11
NEDD8-206ENST00000531430 OR2B6P58173 313 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 SELENBP1Q13228 472 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 TP53BP2Q13625 1128 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 CBFBQ13951 182 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 KLHL26Q53HC5 615 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 C8orf74Q6P047 294 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 ZCCHC12Q6PEW1 402 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 SLC46A3Q7Z3Q1 461 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 SPATA19Q7Z5L4 167 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 CCDC63Q8NA47 563 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 OR52E4Q8NGH9 312 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 OR5W2Q8NH69 310 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 ZNF563Q8TA94 476 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 ZNF75CPQ92670 426 aaPredicted RBP8.11□□□□□ -1.11
NEDD8-206ENST00000531430 ZNF524Q96C55 264 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 ZHX1-C8orf76Q96EF9 292 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 GIMAP5Q96F15 307 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 GSTO2Q9H4Y5 243 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 ZDHHC18Q9NUE0 388 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 TMEFF2Q9UIK5 374 aaPredicted RBP8.11□□□□□ -1.11
NEDD8-206ENST00000531430 ICAM5Q9UMF0 924 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 MOKQ9UQ07 419 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 DTNAQ9Y4J8 743 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 KCNE3Q9Y6H6 103 aa8.11□□□□□ -1.11
NEDD8-206ENST00000531430 A0A087WUV0 522 aaPredicted RBP8.1□□□□□ -1.11
NEDD8-206ENST00000531430 EXOC1LA0A1B0GW35 172 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 SERTM1A2A2V5 107 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 ATP6V1G2-DDX39BF2Z307 99 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 SLC28A1O00337 649 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 CFLARO15519 480 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 RGS9O75916 674 aaPredicted RBP8.1□□□□□ -1.11
NEDD8-206ENST00000531430 RSL1D1O76021 490 aaKnown RBP8.1□□□□□ -1.11
NEDD8-206ENST00000531430 H6PDO95479 791 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 HSPA4LO95757 839 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 MYL2P10916 166 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 UBL4AP11441 157 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 COX5AP20674 150 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 CFPP27918 469 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 CCT3P49368 545 aaKnown RBP8.1□□□□□ -1.11
NEDD8-206ENST00000531430 SESN3P58005 492 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 SNRPD2P62316 118 aaKnown RBP8.1□□□□□ -1.11
NEDD8-206ENST00000531430 CSNK2A1P68400 391 aaPredicted RBP8.1□□□□□ -1.11
NEDD8-206ENST00000531430 PHC1P78364 1004 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 GPR68Q15743 365 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 GABRA6Q16445 453 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 GALNTL6Q49A17 601 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 DCST2Q5T1A1 773 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 CLEC6AQ6EIG7 209 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 OR7E24Q6IFN5 339 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 KLHL24Q6TFL4 600 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 TMPPEQ6ZT21 453 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 TRIM46Q7Z4K8 759 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 MTDHQ86UE4 582 aaKnown RBP8.1□□□□□ -1.11
NEDD8-206ENST00000531430 CCDC103Q8IW40 242 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 RFLNBQ8N5W9 214 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.1□□□□□ -1.11
NEDD8-206ENST00000531430 FAM120BQ96EK7 910 aaKnown RBP8.1□□□□□ -1.11
NEDD8-206ENST00000531430 L3HYPDHQ96EM0 354 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 MUS81Q96NY9 551 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 SORCS2Q96PQ0 1159 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 KCNS3Q9BQ31 491 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 PIGUQ9H490 435 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 C1orf109Q9NX04 203 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 TAS2R16Q9NYV7 291 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 METRNQ9UJH8 293 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 ZNF180Q9UJW8 692 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 PTGDR2Q9Y5Y4 395 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 ACTL7BQ9Y614 415 aa8.1□□□□□ -1.11
NEDD8-206ENST00000531430 LOC390937A0A1W2PQ73 354 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms