RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 WBP2NLQ6ICG8 309 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 ASB18Q6ZVZ8 466 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 ICA1LQ8NDH6 482 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 C1GALT1C1Q96EU7 318 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 REEP1Q9H902 201 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 RNPEPL1Q9HAU8 725 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 MED17Q9NVC6 651 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 SELENONQ9NZV5 590 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 DKKL1Q9UK85 242 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 SAMHD1Q9Y3Z3 626 aaKnown RBP17.31■□□□□ 0.36
SMPD1-205ENST00000531303 MED12Q93074 2177 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 TNFRSF11BO00300 401 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 E2F6O75461 281 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 CBR3O75828 277 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 TRAPPC6AO75865 159 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 OR5F1O95221 314 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 GADD45GO95257 159 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 WISP1O95388 367 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 CCNA2P20248 432 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 GDF1P27539 372 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 FOXK1P85037 733 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 PMP22Q01453 160 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 RIPK1Q13546 671 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 ZNF169Q14929 603 aaPredicted RBP17.3■□□□□ 0.36
SMPD1-205ENST00000531303 RBMXL3Q8N7X1 1067 aaKnown RBP17.3■□□□□ 0.36
SMPD1-205ENST00000531303 LSMEM1Q8N8F7 131 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 OR5M1Q8NGP8 315 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 NPAS1Q99742 590 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 BDH2Q9BUT1 245 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 ACER3Q9NUN7 267 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 STX18Q9P2W9 335 aaKnown RBP17.3■□□□□ 0.36
SMPD1-205ENST00000531303 ACAD8Q9UKU7 415 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 RPH3AQ9Y2J0 694 aaPredicted RBP17.3■□□□□ 0.36
SMPD1-205ENST00000531303 C15orf41Q9Y2V0 281 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 PCDHGB7Q9Y5F8 929 aa17.3■□□□□ 0.36
SMPD1-205ENST00000531303 PIEZO2Q9H5I5 2752 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 SAC3D1A6NKF1 404 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 ADAMDEC1O15204 470 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 HK1P19367 917 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 MST1P26927 711 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 TACR3P29371 465 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 SLC1A3P43003 542 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 ST3GAL3Q11203 375 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 MERTKQ12866 999 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 LAPTM4AQ15012 233 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 ALG10BQ5I7T1 473 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 COLEC12Q5KU26 742 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 ZNF613Q6PF04 617 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 ULK3Q6PHR2 472 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 ZNF605Q86T29 641 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 OFCC1Q8IZS5 231 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 PIK3C3Q8NEB9 887 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 C9orf43Q8TAL5 461 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-205ENST00000531303 RELTQ969Z4 430 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 C3orf49Q96BT1 292 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 CENPNQ96H22 339 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-205ENST00000531303 CNTNAP3BQ96NU0 1288 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 CNTNAP3Q9BZ76 1288 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 TTTY12Q9BZ98 90 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 NTN4Q9HB63 628 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 LUZP4Q9P127 313 aa17.29■□□□□ 0.36
SMPD1-205ENST00000531303 MPDZO75970 2070 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 DSPP15924 2871 aaKnown RBP17.28■□□□□ 0.36
SMPD1-205ENST00000531303 A0A0B4J2E0 115 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 TRBV4-1A0A0J9YWV2 114 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 A0A1B0GX12 115 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 FAAHO00519 579 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 DPM1O60762 260 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 PRKCAP17252 672 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 DSCR4P56555 118 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-205ENST00000531303 FOXF1Q12946 379 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 TRAM2Q15035 370 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 EXOC3L2Q2M3D2 409 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 PLPPR5Q32ZL2 321 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 TMEM179BQ7Z7N9 219 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 NKAIN4Q8IVV8 208 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 TMEM234Q8WY98 164 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 MAN2C1Q9NTJ4 1040 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 C6orf203Q9P0P8 240 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-205ENST00000531303 B4GALT7Q9UBV7 327 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 LYVE1Q9Y5Y7 322 aa17.28■□□□□ 0.36
SMPD1-205ENST00000531303 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 LYPD3O95274 346 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 ZNF23P17027 643 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 SMIM11AP58511 58 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 PPIAP62937 165 aaKnown RBP17.27■□□□□ 0.36
SMPD1-205ENST00000531303 SLC34A1Q06495 639 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 PODNL1Q6PEZ8 512 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 TBPL2Q6SJ96 375 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 WDR88Q6ZMY6 472 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 Q6ZS92 163 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 YRDCQ86U90 279 aaKnown RBP17.27■□□□□ 0.36
SMPD1-205ENST00000531303 P3H2Q8IVL5 708 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 HS3ST5Q8IZT8 346 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 FAM98AQ8NCA5 519 aaKnown RBP17.27■□□□□ 0.36
SMPD1-205ENST00000531303 ATP6V1C2Q8NEY4 427 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 DNAJA4Q8WW22 397 aaPredicted RBP17.27■□□□□ 0.36
SMPD1-205ENST00000531303 ST8SIA1Q92185 356 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 NR4A3Q92570 626 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 POLR2J2Q9GZM3 115 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms