RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 DKKL1Q9UK85 242 aa7.74□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PRDM4Q9UKN5 801 aa7.74□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ACAD8Q9UKU7 415 aa7.74□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 OAZ3Q9UMX2 235 aa7.74□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 BOKQ9UMX3 212 aaPredicted RBP7.74□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 VDAC3Q9Y277 283 aa7.74□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PCDHGA9Q9Y5G4 932 aaKnown RBP7.74□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 LYVE1Q9Y5Y7 322 aa7.74□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SPEGQ15772 3267 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 A0A087WZY1 265 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TRAV17A0A0B4J275 112 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 A0A0B4J2E0 115 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TRBV4-1A0A0J9YWV2 114 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 A0A1B0GX12 115 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 A0A1W2PRQ8 180 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SH3PXD2BA1X283 911 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PINLYPA6NC86 204 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PDLIM1O00151 329 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CHP2O43745 196 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 OR10H3O60404 316 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TRAPPC6AO75865 159 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 THY1P04216 161 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PNMTP11086 282 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PTNP21246 168 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PRKACGP22612 351 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ELAVL4P26378 380 aaKnown RBP7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 GDF1P27539 372 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PEX2P28328 305 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 IFNGR2P38484 337 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 RFC3P40938 356 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 HTR3AP46098 478 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PTDSS1P48651 473 aaKnown RBP7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 MEOX1P50221 254 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 POLR2HP52434 150 aaKnown RBP7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 HMGA2P52926 109 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 DSCR4P56555 118 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 IL1RL1Q01638 556 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 MERTKQ12866 999 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 DGCR6Q14129 220 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 MICAQ29983 383 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TTC33Q6PID6 262 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TBPL2Q6SJ96 375 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 GRINAQ7Z429 371 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 P3H2Q8IVL5 708 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 NKAIN4Q8IVV8 208 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 HS3ST5Q8IZT8 346 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CBR4Q8N4T8 237 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ATG16L2Q8NAA4 619 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ATP6V1C2Q8NEY4 427 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 OR4C15Q8NGM1 316 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 OR5M1Q8NGP8 315 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SLC7A13Q8TCU3 470 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 NRG4Q8WWG1 115 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ST8SIA1Q92185 356 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 C3orf49Q96BT1 292 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 C1GALT1C1Q96EU7 318 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 DTNBP1Q96EV8 351 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 NRBF2Q96F24 287 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ABHD17AQ96GS6 310 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 MPP4Q96JB8 637 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 DHRS1Q96LJ7 313 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 HS6ST2Q96MM7 605 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 BARD1Q99728 777 aaKnown RBP7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PRSS27Q9BQR3 290 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 MFRPQ9BY79 579 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 KLHL4Q9C0H6 718 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ADAM19Q9H013 955 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 VCX3BQ9H321 246 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ANKRD19PQ9H560 264 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 MED17Q9NVC6 651 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 B4GALT7Q9UBV7 327 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 RPH3AQ9Y2J0 694 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 C15orf41Q9Y2V0 281 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 HRH3Q9Y5N1 445 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CSAG2Q9Y5P2 127 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 MAGED1Q9Y5V3 778 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 NUP214P35658 2090 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CCDC88CQ9P219 2028 aa7.73□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 A0A087WUU8 490 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TMED7-TICAM2A0A0A6YYA0 188 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 FAM166BA8MTA8 275 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 B4DXG7 233 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SHISA8B8ZZ34 492 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 KPNA4O00629 521 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CASQ2O14958 399 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 LYPD3O95274 346 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 NTN1O95631 604 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ITGB2P05107 769 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 RFPL3SP0C7P2 107 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PRKCAP17252 672 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 VHLP40337 213 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 APOBEC1P41238 236 aaKnown RBP7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 EIF1P41567 113 aaKnown RBP7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 LIMS1P48059 325 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PPIAP62937 165 aaKnown RBP7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 FOXO1Q12778 655 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 FOXF1Q12946 379 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SEC23BQ15437 767 aa7.72□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SWT1Q5T5J6 900 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms