RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 BTNL10A8MVZ5 291 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 K7EM74 188 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 KLF11O14901 512 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 STX7O15400 261 aaKnown RBP4.1□□□□□ -1.75
CSDE1-212ENST00000529046 UGT1A9O60656 530 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 SCRG1O75711 98 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 ZFAND5O76080 213 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 APOHP02749 345 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-212ENST00000529046 TPM1P09493 284 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 ATP1B2P14415 290 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-212ENST00000529046 UGT1A6P19224 532 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 UGT1A4P22310 534 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 PRDX3P30048 256 aaKnown RBP4.1□□□□□ -1.75
CSDE1-212ENST00000529046 RPL21P46778 160 aaKnown RBP4.1□□□□□ -1.75
CSDE1-212ENST00000529046 KPNA2P52292 529 aaKnown RBP4.1□□□□□ -1.75
CSDE1-212ENST00000529046 ATP12AP54707 1039 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 NAGLUP54802 743 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 DLK1P80370 383 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 KLC1Q07866 573 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 CAMK2DQ13557 499 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 HERC3Q15034 1050 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 CTU2Q2VPK5 515 aaKnown RBP4.1□□□□□ -1.75
CSDE1-212ENST00000529046 FAM174BQ3ZCQ3 159 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 ODF2Q5BJF6 829 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 ZNF789Q5FWF6 425 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 ATP1A1-AS1Q5TC04 95 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 FHL5Q5TD97 284 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 RHBDD2Q6NTF9 364 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 IRGCQ6NXR0 463 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 SUSD1Q6UWL2 747 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 FAM92BQ6ZTR7 304 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 SNX20Q7Z614 316 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 TMEM126BQ8IUX1 230 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 VSTM4Q8IW00 320 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 WDSUB1Q8N9V3 476 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 KIF18AQ8NI77 898 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 OCC1Q8TAD7 63 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 BLOC1S5Q8TDH9 187 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 PEX13Q92968 403 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.1□□□□□ -1.75
CSDE1-212ENST00000529046 PNPLA2Q96AD5 504 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 LRRC45Q96CN5 670 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 HAUS1Q96CS2 278 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 FAM71F1Q96KD3 344 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-212ENST00000529046 LRR1Q96L50 414 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 C12orf66Q96MD2 445 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 QKIQ96PU8 341 aaKnown RBP eCLIP4.1□□□□□ -1.752e-14■■■□□ 16.7
CSDE1-212ENST00000529046 COPS8Q99627 209 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 CHP1Q99653 195 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 GBA3Q9H227 469 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 OR52A5Q9H2C5 316 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 VPS37BQ9H9H4 285 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 AKIRIN1Q9H9L7 192 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-212ENST00000529046 UGT1A7Q9HAW7 530 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 UGT1A10Q9HAW8 530 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 UGT1A8Q9HAW9 530 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 KLHL8Q9P2G9 620 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-212ENST00000529046 LNPEPQ9UIQ6 1025 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 AP1M2Q9Y6Q5 423 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 RELNP78509 3460 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 PTPN13Q12923 2485 aa4.1□□□□□ -1.75
CSDE1-212ENST00000529046 NAV2Q8IVL1 2488 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 TRAV24A0A0B4J272 114 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 OR6C74A6NCV1 312 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 ANXA2P2A6NMY6 339 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 C2orf74A8MZ97 194 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 LIN7AO14910 233 aaPredicted RBP4.09□□□□□ -1.75
CSDE1-212ENST00000529046 ARPC2O15144 300 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 PSMD3O43242 534 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 SPOPO43791 374 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 KLF7O75840 302 aaPredicted RBP4.09□□□□□ -1.75
CSDE1-212ENST00000529046 KRT33AO76009 404 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 ACSL3O95573 720 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 HSPA4LO95757 839 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 PTMAP06454 111 aaKnown RBP4.09□□□□□ -1.75
CSDE1-212ENST00000529046 SLC35G4P0C7Q5 338 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 IRF2P14316 349 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 CHRNB4P30926 498 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 CA5AP35218 305 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 CETN2P41208 172 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 NSG1P42857 185 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 GABRA4P48169 554 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 ZNF140P52738 457 aaPredicted RBP4.09□□□□□ -1.75
CSDE1-212ENST00000529046 PPP1CAP62136 330 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 VEZF1Q14119 521 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 PRPSAP1Q14558 356 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 ITIH4Q14624 930 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 NCF4Q15080 339 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 PARP6Q2NL67 630 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 SLC35D3Q5M8T2 416 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 ANKRD20A2Q5SQ80 823 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 ANKRD20A1Q5TYW2 823 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 ANKRD20A3Q5VUR7 823 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 KCTD11Q693B1 232 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 FAM199XQ6PEV8 388 aaPredicted RBP4.09□□□□□ -1.75
CSDE1-212ENST00000529046 FAM151BQ6UXP7 276 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 TMEM135Q86UB9 458 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 RTN4RL2Q86UN3 420 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 AMIGO1Q86WK6 493 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 TBC1D21Q8IYX1 336 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms