RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CLDN18P56856 261 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 UFM1P61960 85 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 POU6F2P78424 691 aaPredicted RBP7.61□□□□□ -1.19
SSBP3-212ENST00000528930 ELF3P78545 371 aaPredicted RBP7.61□□□□□ -1.19
SSBP3-212ENST00000528930 C17orf67Q0P5P2 114 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 STX5Q13190 355 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 TP53BP2Q13625 1128 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 SLC25A35Q3KQZ1 300 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 SLC9B1Q4ZJI4 515 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 SPANXN4Q5MJ08 99 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 PRR31Q5SQ13 230 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 CCNJQ5T5M9 372 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 NSUN5P2Q63ZY6 315 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 C12orf54Q6X4T0 127 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 C6orf120Q7Z4R8 191 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 SPATA19Q7Z5L4 167 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 IFNEQ86WN2 208 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 LACC1Q8IV20 430 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 CLEC4FQ8N1N0 589 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 COX18Q8N8Q8 333 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 OR4K17Q8NGC6 315 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 OR5AK3PQ8NH89 298 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 PIWIL2Q8TC59 973 aaKnown RBP7.61□□□□□ -1.19
SSBP3-212ENST00000528930 ZPLD1Q8TCW7 415 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 ADAMTS15Q8TE58 950 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 CDS1Q92903 461 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 MOAP1Q96BY2 351 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 PERPQ96FX8 193 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 TUBA1CQ9BQE3 449 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 TBL1XR1Q9BZK7 514 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 SDHAF3Q9NRP4 125 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 AIG1Q9NVV5 245 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 DKKL1Q9UK85 242 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 GPR45Q9Y5Y3 372 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 A0A1W2PQD3 144 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 MBD3L3A6NE82 208 aaPredicted RBP7.6□□□□□ -1.19
SSBP3-212ENST00000528930 TRPC5OSA6NMA1 111 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 HSPB2A8KAH6 182 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 A8MV72 311 aaPredicted RBP7.6□□□□□ -1.19
SSBP3-212ENST00000528930 FAM47E-STBD1D6RA91 191 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 NPIPB9F8W1W9 429 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 SLCO1B7G3V0H7 640 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 PDLIM1O00151 329 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 NDUFB5O43674 189 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 C1QCP02747 245 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 HK1P19367 917 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 DRD4P21917 467 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 MATN1P21941 496 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 TCEA1P23193 301 aaKnown RBP7.6□□□□□ -1.19
SSBP3-212ENST00000528930 GCKP35557 465 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 ZNF136P52737 540 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 SUCLG1P53597 346 aaKnown RBP7.6□□□□□ -1.19
SSBP3-212ENST00000528930 NME5P56597 212 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 BLMHQ13867 455 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 GANABQ14697 944 aaKnown RBP7.6□□□□□ -1.19
SSBP3-212ENST00000528930 SF3B4Q15427 424 aaKnown RBP eCLIP7.6□□□□□ -1.192e-12■■■■□ 19.7
SSBP3-212ENST00000528930 CD226Q15762 336 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 HSPB2Q16082 182 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 BCL2A1Q16548 175 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 DPY19L1Q2PZI1 675 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 TMEM44Q2T9K0 475 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 SPDYE7PQ495Y7 208 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 GLYR1Q49A26 553 aaPredicted RBP7.6□□□□□ -1.19
SSBP3-212ENST00000528930 DCST2Q5T1A1 773 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 ANXA8L1Q5VT79 327 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 AP1ARQ63HQ0 302 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 AAGABQ6PD74 315 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 ENPP6Q6UWR7 440 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 PLXDC2Q6UX71 529 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 ANKRD46Q86W74 232 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 RELL2Q8NC24 303 aaPredicted RBP7.6□□□□□ -1.19
SSBP3-212ENST00000528930 CCDC197Q8NCU1 140 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 OR5D16Q8NGK9 328 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 OR5M1Q8NGP8 315 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 MBD3L2Q8NHZ7 208 aaPredicted RBP7.6□□□□□ -1.19
SSBP3-212ENST00000528930 ACTRT2Q8TDY3 377 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 JADE3Q92613 823 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 C1GALT1C1Q96EU7 318 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 DTNBP1Q96EV8 351 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 CHMP6Q96FZ7 201 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 SFXN2Q96NB2 322 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 OR7D2Q96RA2 312 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 OR52B2Q96RD2 323 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 TRIB1Q96RU8 372 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 KLHDC3Q9BQ90 382 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 C7orf69Q9H7B7 122 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 PTGES2Q9H7Z7 377 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 CALHM2Q9HA72 323 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 UBQLN4Q9NRR5 601 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 FAF1Q9UNN5 650 aaPredicted RBP7.6□□□□□ -1.19
SSBP3-212ENST00000528930 ZNF337Q9Y3M9 751 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 DOCK7Q96N67 2140 aa7.6□□□□□ -1.19
SSBP3-212ENST00000528930 NPIPA5A0A0B4J1W7 369 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 RNF103-CHMP3A0A140T963 221 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 OR2M5A3KFT3 312 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 C9JVG2 144 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 E9PBE3 544 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 NPIPA7E9PJI5 369 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 H0YC42 278 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 SYT5O00445 386 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms