RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 RANBP3LQ86VV4 465 aaPredicted RBP11.04□□□□□ -0.64
TRAF3IP2-211ENST00000528599 ZDHHC21Q8IVQ6 265 aa11.04□□□□□ -0.64
TRAF3IP2-211ENST00000528599 C1GALT1C1Q96EU7 318 aa11.04□□□□□ -0.64
TRAF3IP2-211ENST00000528599 ZNF300Q96RE9 604 aaPredicted RBP11.04□□□□□ -0.64
TRAF3IP2-211ENST00000528599 NPAS1Q99742 590 aa11.04□□□□□ -0.64
TRAF3IP2-211ENST00000528599 CHID1Q9BWS9 393 aa11.04□□□□□ -0.64
TRAF3IP2-211ENST00000528599 KLHL4Q9C0H6 718 aa11.04□□□□□ -0.64
TRAF3IP2-211ENST00000528599 SLC25A18Q9H1K4 315 aa11.04□□□□□ -0.64
TRAF3IP2-211ENST00000528599 UBQLN3Q9H347 655 aa11.04□□□□□ -0.64
TRAF3IP2-211ENST00000528599 MED17Q9NVC6 651 aa11.04□□□□□ -0.64
TRAF3IP2-211ENST00000528599 TESQ9UGI8 421 aaKnown RBP11.04□□□□□ -0.64
TRAF3IP2-211ENST00000528599 CPSF4LA6NMK7 179 aaKnown RBP11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 FAM166BA8MTA8 275 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 FAAHO00519 579 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 FFAR1O14842 300 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 FMO6PO60774 539 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 FABP3P05413 133 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 PGCP20142 388 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 DPP4P27487 766 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 FOXK1P85037 733 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 PLGLB1Q02325 96 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 PIN1Q13526 163 aaPredicted RBP11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 QPRTQ15274 297 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 OR1Q1Q15612 314 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 HYAL4Q2M3T9 481 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 PIWIL3Q7Z3Z3 882 aaKnown RBP11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 CADM2Q8N3J6 435 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 TMEM251Q8N6I4 163 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 LSMEM1Q8N8F7 131 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 Q8NA96 180 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 LSM14AQ8ND56 463 aaKnown RBP11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 PNPLA2Q96AD5 504 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 TAAR6Q96RI8 345 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 ZNF559Q9BR84 538 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 ZNF703Q9H7S9 590 aaPredicted RBP11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 PTGES2Q9H7Z7 377 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 A4GNTQ9UNA3 340 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 VDAC3Q9Y277 283 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 AP4S1Q9Y587 144 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 NCKAP5O14513 1909 aa11.03□□□□□ -0.64
TRAF3IP2-211ENST00000528599 A0A1B0GWA3 101 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 SHISA8B8ZZ34 492 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 ZIC3O60481 467 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 PRSS23O95084 383 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 THY1P04216 161 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 CELA3AP09093 270 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 TCEA1P23193 301 aaKnown RBP11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 GDF1P27539 372 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 DSCR4P56555 118 aaPredicted RBP11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 PPIAP62937 165 aaKnown RBP11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 PLPPR5Q32ZL2 321 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 RPUSD3Q6P087 351 aaKnown RBP11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 ZNF843Q8N446 348 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 FAM98AQ8NCA5 519 aaKnown RBP11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 ZNF563Q8TA94 476 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 ADAMTS16Q8TE57 1224 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 TRIM2Q9C040 744 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 ARMC1Q9NVT9 282 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 TAS2R10Q9NYW0 307 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 RHCGQ9UBD6 479 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 RIMS3Q9UJD0 308 aa11.02□□□□□ -0.64
TRAF3IP2-211ENST00000528599 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 H0YJX3 145 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 ETV2O00321 342 aaPredicted RBP11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 TIPRLO75663 272 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 LYPD3O95274 346 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 RASAL1O95294 804 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 NTN1O95631 604 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 GP1BBP13224 206 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 UQCRBP14927 111 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 PRKCAP17252 672 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 RHCEP18577 417 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 SRD5A2P31213 254 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 SLC1A3P43003 542 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 MAGEA5P43359 124 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 ZNF41P51814 821 aaPredicted RBP11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 COPZ1P61923 177 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 NFATC3Q12968 1075 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 GANABQ14697 944 aaKnown RBP11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 TOMM20Q15388 145 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 WBP2NLQ6ICG8 309 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 IZUMO2Q6UXV1 221 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 PLEKHM3Q6ZWE6 761 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 YRDCQ86U90 279 aaKnown RBP11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 FAM83FQ8NEG4 500 aaPredicted RBP11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 OR5M1Q8NGP8 315 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 POC1BQ8TC44 478 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 PRRC1Q96M27 445 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 NR1H4Q96RI1 486 aaPredicted RBP11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 PIP5K1AQ99755 562 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 ADAM19Q9H013 955 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 TMEM27Q9HBJ8 222 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 ACER3Q9NUN7 267 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 B4GALT7Q9UBV7 327 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 DKKL1Q9UK85 242 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 ACAD8Q9UKU7 415 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 A0A087WZY1 265 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 A0A0B4J2E0 115 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 A0A1B0GX12 115 aa11.01□□□□□ -0.65
TRAF3IP2-211ENST00000528599 TRAPPC13A5PLN9 417 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms