RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 C16orf58Q96GQ5 468 aa10.19□□□□□ -0.78
CMTM1-211ENST00000528484 EGLN2Q96KS0 407 aa10.19□□□□□ -0.78
CMTM1-211ENST00000528484 PIGUQ9H490 435 aa10.19□□□□□ -0.78
CMTM1-211ENST00000528484 TAS2R16Q9NYV7 291 aa10.19□□□□□ -0.78
CMTM1-211ENST00000528484 NPAP1Q9NZP6 1156 aa10.19□□□□□ -0.78
CMTM1-211ENST00000528484 DCDC2Q9UHG0 476 aa10.19□□□□□ -0.78
CMTM1-211ENST00000528484 ICAM5Q9UMF0 924 aa10.19□□□□□ -0.78
CMTM1-211ENST00000528484 HEATR1Q9H583 2144 aaKnown RBP10.18□□□□□ -0.78
CMTM1-211ENST00000528484 SULT2B1O00204 365 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 GPR171O14626 319 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 ZNF264O43296 627 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 EIF4E2O60573 245 aaKnown RBP10.18□□□□□ -0.78
CMTM1-211ENST00000528484 TBX19O60806 448 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 HMGN2P05204 90 aaKnown RBP10.18□□□□□ -0.78
CMTM1-211ENST00000528484 PGRP06401 933 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 UBL4AP11441 157 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 APEHP13798 732 aaKnown RBP10.18□□□□□ -0.78
CMTM1-211ENST00000528484 PRPH2P23942 346 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 ATP12AP54707 1039 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 TGFBR3Q03167 851 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 QPRTQ15274 297 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 CARTPTQ16568 116 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 IQCCQ4KMZ1 466 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 KLHL26Q53HC5 615 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 FAM120AOSQ5T036 256 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 DCST2Q5T1A1 773 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 UBAP2Q5T6F2 1119 aaKnown RBP10.18□□□□□ -0.78
CMTM1-211ENST00000528484 CDC73Q6P1J9 531 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 KLHL24Q6TFL4 600 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 CBLN3Q6UW01 205 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 FRMD7Q6ZUT3 714 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 ZNF572Q7Z3I7 529 aaPredicted RBP10.18□□□□□ -0.78
CMTM1-211ENST00000528484 ZNF540Q8NDQ6 660 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 OR56A1Q8NGH5 318 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 GPR119Q8TDV5 335 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 SLC25A43Q8WUT9 341 aaPredicted RBP10.18□□□□□ -0.78
CMTM1-211ENST00000528484 MTERF3Q96E29 417 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 FAM120BQ96EK7 910 aaKnown RBP10.18□□□□□ -0.78
CMTM1-211ENST00000528484 TSSK3Q96PN8 268 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 ZNF300Q96RE9 604 aaPredicted RBP10.18□□□□□ -0.78
CMTM1-211ENST00000528484 ACTRT3Q9BYD9 372 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 GRPEL1Q9HAV7 217 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 MYOZ1Q9NP98 299 aaPredicted RBP10.18□□□□□ -0.78
CMTM1-211ENST00000528484 TMED5Q9Y3A6 229 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 DTNAQ9Y4J8 743 aa10.18□□□□□ -0.78
CMTM1-211ENST00000528484 YLPM1P49750 1951 aaKnown RBP10.17□□□□□ -0.78
CMTM1-211ENST00000528484 TMEM114B3SHH9 223 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 SMAD9O15198 467 aaKnown RBP10.17□□□□□ -0.78
CMTM1-211ENST00000528484 TCF21O43680 179 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 EFNA2O43921 213 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 MRPL33O75394 65 aaKnown RBP10.17□□□□□ -0.78
CMTM1-211ENST00000528484 CYP7B1O75881 506 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 IGHV3-9P01782 118 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 TFPIP10646 304 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 PGCP20142 388 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 IGFBP5P24593 272 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 APOBEC3AP31941 199 aaPredicted RBP10.17□□□□□ -0.78
CMTM1-211ENST00000528484 FRKP42685 505 aaPredicted RBP10.17□□□□□ -0.78
CMTM1-211ENST00000528484 DIO1P49895 249 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 RNF144AP50876 292 aaPredicted RBP10.17□□□□□ -0.78
CMTM1-211ENST00000528484 SNRPD2P62316 118 aaKnown RBP10.17□□□□□ -0.78
CMTM1-211ENST00000528484 RPL38P63173 70 aaKnown RBP10.17□□□□□ -0.78
CMTM1-211ENST00000528484 MLC1Q15049 377 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 PDK3Q15120 406 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 TOMM34Q15785 309 aaPredicted RBP10.17□□□□□ -0.78
CMTM1-211ENST00000528484 TIGD2Q4W5G0 525 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 SLC25A53Q5H9E4 307 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 BHLHB9Q6PI77 547 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 TMPPEQ6ZT21 453 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 ARIH2OSQ8N7S6 290 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 CCDC63Q8NA47 563 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 CLHC1Q8NHS4 586 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 PIGXQ8TBF5 258 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 ST8SIA1Q92185 356 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 C3orf49Q96BT1 292 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 MOAP1Q96BY2 351 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 KCNS3Q9BQ31 491 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 ATAD3AQ9NVI7 634 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 UPB1Q9UBR1 384 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 AMDHD2Q9Y303 409 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 SLC25A15Q9Y619 301 aa10.17□□□□□ -0.78
CMTM1-211ENST00000528484 MALRD1Q5VYJ5 2156 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 NPIPA5A0A0B4J1W7 369 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 NPIPA7E9PJI5 369 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 GLRA3O75311 464 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 ERCC1P07992 297 aaPredicted RBP10.16□□□□□ -0.78
CMTM1-211ENST00000528484 ABHD2P08910 425 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 NPIPA8P0DM63 369 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 SDC1P18827 310 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 FKBP2P26885 142 aaKnown RBP10.16□□□□□ -0.78
CMTM1-211ENST00000528484 MAPK1P28482 360 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 MAGEA8P43361 318 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 ETF1P62495 437 aaKnown RBP10.16□□□□□ -0.78
CMTM1-211ENST00000528484 PHC1P78364 1004 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 SPOCK1Q08629 439 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 MERTKQ12866 999 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 KIAA0040Q15053 153 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 LSM12Q3MHD2 195 aaKnown RBP10.16□□□□□ -0.78
CMTM1-211ENST00000528484 CCDC153Q494R4 210 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 ZNF385BQ569K4 471 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms