RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 FAM81AQ8TBF8 368 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 CCDC12Q8WUD4 166 aaPredicted RBP4.87□□□□□ -1.63
PCF11-202ENST00000528336 SPRYD4Q8WW59 207 aaPredicted RBP4.87□□□□□ -1.63
PCF11-202ENST00000528336 PIBF1Q8WXW3 757 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 PIGCQ92535 297 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 NXPE2Q96DL1 559 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 RBM41Q96IZ5 413 aaKnown RBP4.87□□□□□ -1.63
PCF11-202ENST00000528336 ELMO2Q96JJ3 720 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 FAM218AQ96MZ4 157 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 WRAP53Q9BUR4 548 aaKnown RBP4.87□□□□□ -1.63
PCF11-202ENST00000528336 IL22Q9GZX6 179 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 LRRC19Q9H756 370 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 DCLRE1BQ9H816 532 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 B3GAT2Q9NPZ5 323 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 CHRAC1Q9NRG0 131 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 SMOXQ9NWM0 555 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 SLC2A8Q9NY64 477 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 PIPOXQ9P0Z9 390 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 CDH9Q9ULB4 789 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 DDX19BQ9UMR2 479 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 RNF115Q9Y4L5 304 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 ATG4BQ9Y4P1 393 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 ANKRD31Q8N7Z5 1873 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 LAMB2P55268 1798 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 LOC105371242A0A075B767 164 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 A0A1B0GUH1 482 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 SNTNA6NMZ2 147 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 TMEM150CB9EJG8 249 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 NPIPA2E9PIF3 369 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 PDLIM1O00151 329 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 EEF2KO00418 725 aaKnown RBP4.86□□□□□ -1.63
PCF11-202ENST00000528336 ZW10O43264 779 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 NEBLO76041 1014 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 TM7SF2O76062 418 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 MCF2P10911 925 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 AADACP22760 399 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 SSTR1P30872 391 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 CCNHP51946 323 aaPredicted RBP4.86□□□□□ -1.63
PCF11-202ENST00000528336 ARHGDIAP52565 204 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 NAPAP54920 295 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 RAB11AP62491 216 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 ZFP36L1Q07352 338 aaKnown RBP4.86□□□□□ -1.63
PCF11-202ENST00000528336 SLC3A1Q07837 685 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 IL10RBQ08334 325 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 FGL1Q08830 312 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 RAB11BQ15907 218 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 HSDL1Q3SXM5 330 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 FGD3Q5JSP0 725 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 BLOC1S2Q6QNY1 142 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 EIF3MQ7L2H7 374 aaKnown RBP4.86□□□□□ -1.63
PCF11-202ENST00000528336 SLC22A16Q86VW1 577 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 FAM58AQ8N1B3 248 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 FNDC5Q8NAU1 212 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 OR5T2Q8NGG2 359 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 TSSK2Q96PF2 358 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 CCNL2Q96S94 520 aaPredicted RBP4.86□□□□□ -1.63
PCF11-202ENST00000528336 ATOH8Q96SQ7 321 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 OMDQ99983 421 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 RBM24Q9BX46 236 aaKnown RBP4.86□□□□□ -1.63
PCF11-202ENST00000528336 SPZ1Q9BXG8 430 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 HOXD1Q9GZZ0 328 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 WWP1Q9H0M0 922 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 MRPS30Q9NP92 439 aaKnown RBP4.86□□□□□ -1.63
PCF11-202ENST00000528336 MRPL22Q9NWU5 206 aaKnown RBP4.86□□□□□ -1.63
PCF11-202ENST00000528336 TEX10Q9NXF1 929 aaPredicted RBP4.86□□□□□ -1.63
PCF11-202ENST00000528336 PAK5Q9P286 719 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 STOX2Q9P2F5 926 aaPredicted RBP4.86□□□□□ -1.63
PCF11-202ENST00000528336 P2RX2Q9UBL9 471 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 IL36AQ9UHA7 158 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 ZNF639Q9UID6 485 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 RUVBL2Q9Y230 463 aaKnown RBP4.86□□□□□ -1.63
PCF11-202ENST00000528336 PPIL1Q9Y3C6 166 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 RHBDD3Q9Y3P4 386 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 COLEC10Q9Y6Z7 277 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 DDX60Q8IY21 1712 aaKnown RBP4.86□□□□□ -1.63
PCF11-202ENST00000528336 DLEC1Q9Y238 1755 aa4.86□□□□□ -1.63
PCF11-202ENST00000528336 METTL21EPA6NDL7 271 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 E9PMD0 336 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 SGK494L7N484 410 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 CHEK1O14757 476 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 ZSCAN12O43309 604 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 SULT1B1O43704 296 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 CRLF1O75462 422 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 CLN5O75503 358 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 NDUFA7O95182 113 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 SP9P0CG40 484 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 GP9P14770 177 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 TPSB2P20231 275 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 PCMT1P22061 227 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 LCN1P31025 176 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 CD80P33681 288 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 BASP1P80723 227 aaKnown RBP4.85□□□□□ -1.63
PCF11-202ENST00000528336 SARNPP82979 210 aaKnown RBP4.85□□□□□ -1.63
PCF11-202ENST00000528336 BDH1Q02338 343 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 ENPEPQ07075 957 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 FASTKD3Q14CZ7 662 aaKnown RBP4.85□□□□□ -1.63
PCF11-202ENST00000528336 TPSAB1Q15661 275 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 FAM189A2Q15884 450 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 DUSP5Q16690 384 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 ALKBH6Q3KRA9 238 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms