RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CHRM4P08173 479 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 TFPTP0C1Z6 253 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 IL7RP16871 459 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 RPS4Y1P22090 263 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 SHC1P29353 583 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 SFTPDP35247 375 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 CD79BP40259 229 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 APOBEC1P41238 236 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 CRATP43155 626 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 RAC3P60763 192 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 FADDQ13158 208 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 RNPS1Q15287 305 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 MAPK11Q15759 364 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 ZSWIM7Q19AV6 140 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 C6orf10Q5SRN2 563 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 LRIF1Q5T3J3 769 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 ZNF474Q6S9Z5 364 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 TMEM200AQ86VY9 491 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 PEX5LQ8IYB4 626 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 ARFGAP2Q8N6H7 521 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 OR6K3Q8NGY3 331 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 PNPT1Q8TCS8 783 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 SPDL1Q96EA4 605 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 REXO5Q96IC2 774 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 PAIP1Q9H074 479 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 RABEP2Q9H5N1 569 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 GP6Q9HCN6 339 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 SLC52A3Q9NQ40 469 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 RASSF1Q9NS23 344 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 NDRG3Q9UGV2 375 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 PROCRQ9UNN8 238 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 PCDHB14Q9Y5E9 798 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 GMEB1Q9Y692 573 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 FBN2P35556 2912 aa10.84□□□□□ -0.67
TRAPPC4-209ENST00000528230 TMEM247A6NEH6 219 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 CLIC1O00299 241 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 FAAHO00519 579 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 BMP2P12643 396 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 ETFAP13804 333 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 HOXB9P17482 250 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 CLK1P49759 484 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 CRISP3P54108 245 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 CTBP2P56545 445 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 DSTNP60981 165 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 SIRPAP78324 504 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 MERTKQ12866 999 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 SQLEQ14534 574 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 RGNQ15493 299 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 ZNF239Q16600 458 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 PRAMEF8Q5VWM4 474 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 PRAMEF7Q5VXH5 474 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 PPP4R4Q6NUP7 873 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 C3orf33Q6P1S2 294 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 SLC2A7Q6PXP3 512 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 DNAJC14Q6Y2X3 702 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 PLEKHM3Q6ZWE6 761 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 GRINAQ7Z429 371 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 SLC43A2Q8N370 569 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 ZNF610Q8N9Z0 462 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 ZNF563Q8TA94 476 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 LINC01560Q8TB33 94 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 RNF128Q8TEB7 428 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 SLC25A43Q8WUT9 341 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 SLC38A5Q8WUX1 472 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 WDR60Q8WVS4 1066 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 POLDIP3Q9BY77 421 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 QRSL1Q9H0R6 528 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 OPN3Q9H1Y3 402 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 COQ10BQ9H8M1 238 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 DNAJB12Q9NXW2 375 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 CCDC167Q9P0B6 97 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 SPIN1Q9Y657 262 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 DCHS2Q6V1P9 2916 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 PDZD2O15018 2839 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 ANKHD1Q8IWZ3 2542 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 DSPPQ9NZW4 1301 aa10.83□□□□□ -0.68
TRAPPC4-209ENST00000528230 A0A0G2JPF8 293 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 SH3D21A4FU49 640 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 CLDN24A6NM45 220 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 HNRNPCL2B2RXH8 293 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 HNRNPCL3B7ZW38 293 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 HNRNPCL1O60812 293 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 BCAS1O75363 584 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 PRKD3O94806 890 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 HNRNPCL4P0DMR1 293 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 POU2F1P14859 743 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 PPIBP23284 216 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 SLC7A1P30825 629 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 RYKP34925 604 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 CPOXP36551 454 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 HTR3AP46098 478 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 MAP2K6P52564 334 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 PLAURQ03405 335 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 FAM27E3Q08E93 113 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 GTDC1Q4AE62 458 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 AGKQ53H12 422 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 METTL21CQ5VZV1 264 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 FCRLAQ7L513 359 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 CDH24Q86UP0 819 aa10.82□□□□□ -0.68
TRAPPC4-209ENST00000528230 LURAP1LQ8IV03 231 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms