RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 COMMD9Q9P000 198 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 LCTP09848 1927 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 FAM171A2A8MVW0 826 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 UPK1AO00322 258 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 OPN1LWP04000 364 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 ZNF26P17031 533 aaPredicted RBP13.97□□□□□ -0.17
USP47-207ENST00000527733 ELAVL4P26378 380 aaKnown RBP13.97□□□□□ -0.17
USP47-207ENST00000527733 RPS5P46782 204 aaKnown RBP13.97□□□□□ -0.17
USP47-207ENST00000527733 GALK2Q01415 458 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 GUSBP11Q6P575 273 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 ZNF627Q7L945 461 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 CHDHQ8NE62 594 aaPredicted RBP13.97□□□□□ -0.17
USP47-207ENST00000527733 CNOT9Q92600 299 aaKnown RBP13.97□□□□□ -0.17
USP47-207ENST00000527733 CLEC4MQ9H2X3 399 aaPredicted RBP13.97□□□□□ -0.17
USP47-207ENST00000527733 MMP27Q9H306 513 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 SIDT1Q9NXL6 827 aaKnown RBP13.97□□□□□ -0.17
USP47-207ENST00000527733 TSC22D4Q9Y3Q8 395 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 NPFFR2Q9Y5X5 522 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 LRRC37A2A6NM11 1700 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 SERTM1A2A2V5 107 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 SMIM30A4D0T7 59 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 LGI1O95970 557 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 THBS1P07996 1170 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 FASLGP48023 281 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 ADAM8P78325 824 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 RAB40BQ12829 278 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 GLT8D1Q68CQ7 371 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 UGT2A3Q6UWM9 527 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 RASSF6Q6ZTQ3 369 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 CAMKMTQ7Z624 323 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 ZFP41Q8N8Y5 198 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 B3GNT7Q8NFL0 401 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 OR13C2Q8NGS9 318 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 PGAM5Q96HS1 289 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 OR2A5Q96R48 311 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 CSF3RQ99062 836 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 FUNDC2Q9BWH2 189 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 ZNF385DQ9H6B1 395 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 CHMP1AQ9HD42 196 aaPredicted RBP13.97□□□□□ -0.17
USP47-207ENST00000527733 MEN1O00255 615 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 ZNF208O43345 1280 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 BMP1P13497 986 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 GADD45AP24522 165 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 WNT4P56705 351 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 HNRNPA0Q13151 305 aaKnown RBP13.96□□□□□ -0.17
USP47-207ENST00000527733 TBPL2Q6SJ96 375 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 DGLUCYQ7Z3D6 616 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 SYT14Q8NB59 555 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 TMEM163Q8TC26 289 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 GATA6Q92908 595 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 CNOT2Q9NZN8 540 aaKnown RBP13.96□□□□□ -0.17
USP47-207ENST00000527733 TPD52L2O43399 206 aaKnown RBP13.96□□□□□ -0.17
USP47-207ENST00000527733 ZNF432O94892 652 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 GDI2P50395 445 aaKnown RBP13.96□□□□□ -0.17
USP47-207ENST00000527733 SF3B4Q15427 424 aaKnown RBP eCLIP13.96□□□□□ -0.171e-6■□□□□ 10.9
USP47-207ENST00000527733 ZNF836Q6ZNA1 936 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 MORN4Q8NDC4 146 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 TWSG1Q9GZX9 223 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 BCL2L10Q9HD36 194 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 DHDHQ9UQ10 334 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 SUSD5O60279 629 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 SRSF5Q13243 272 aaKnown RBP13.96□□□□□ -0.17
USP47-207ENST00000527733 TMEM176BQ3YBM2 270 aaPredicted RBP13.96□□□□□ -0.17
USP47-207ENST00000527733 GDF7Q7Z4P5 450 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 CARFQ8N187 725 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 PDCD10Q9BUL8 212 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 BCL2L14Q9BZR8 327 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 EGLN3Q9H6Z9 239 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 PAK1IP1Q9NWT1 392 aaPredicted RBP13.96□□□□□ -0.17
USP47-207ENST00000527733 ASB4Q9Y574 426 aa13.96□□□□□ -0.17
USP47-207ENST00000527733 HTR3EA5X5Y0 456 aa13.96□□□□□ -0.18
USP47-207ENST00000527733 EIF4E2O60573 245 aaKnown RBP13.96□□□□□ -0.18
USP47-207ENST00000527733 LCKP06239 509 aa13.96□□□□□ -0.18
USP47-207ENST00000527733 SLC2A2P11168 524 aaPredicted RBP13.96□□□□□ -0.18
USP47-207ENST00000527733 ILKQ13418 452 aa13.96□□□□□ -0.18
USP47-207ENST00000527733 C22orf42Q6IC83 251 aa13.96□□□□□ -0.18
USP47-207ENST00000527733 DHRS4L2Q6PKH6 230 aa13.96□□□□□ -0.18
USP47-207ENST00000527733 BTN2A1Q7KYR7 527 aa13.96□□□□□ -0.18
USP47-207ENST00000527733 C16orf52Q8NHV5 167 aa13.96□□□□□ -0.18
USP47-207ENST00000527733 ALG8Q9BVK2 526 aa13.96□□□□□ -0.18
USP47-207ENST00000527733 GPN1Q9HCN4 374 aaPredicted RBP13.96□□□□□ -0.18
USP47-207ENST00000527733 UCKL1Q9NWZ5 548 aa13.96□□□□□ -0.18
USP47-207ENST00000527733 STUB1Q9UNE7 303 aa13.96□□□□□ -0.18
USP47-207ENST00000527733 FAM183AA6NL82 134 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 SHISA7A6NL88 538 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 TGFBR2P37173 567 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 CWF19L1Q69YN2 538 aaKnown RBP13.95□□□□□ -0.18
USP47-207ENST00000527733 TMPPEQ6ZT21 453 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 GALNT6Q8NCL4 622 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 MYO16Q9Y6X6 1858 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 IGHV5-51A0A0C4DH38 117 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 SPINT1O43278 529 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 ZGLP1P0C6A0 271 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 ZNF12P17014 697 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 DPP4P27487 766 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 ZNF829Q3KNS6 432 aaPredicted RBP13.95□□□□□ -0.18
USP47-207ENST00000527733 ZNF793Q6ZN11 406 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 HDHD5Q9BXW7 423 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 DUSP15Q9H1R2 295 aaPredicted RBP13.95□□□□□ -0.18
USP47-207ENST00000527733 DSN1Q9H410 356 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms