RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 AZGP1P25311 298 aaKnown RBP14.15□□□□□ -0.14
USH1C-207ENST00000527720 MTNR1BP49286 362 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 GPR143P51810 404 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 HSD17B7P56937 341 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 ACTC1P68032 377 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 ACTA1P68133 377 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 FUT7Q11130 342 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 ZC3H14Q6PJT7 736 aaKnown RBP14.15□□□□□ -0.14
USH1C-207ENST00000527720 TMEM91Q6ZNR0 172 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 CELF2-AS1Q8N7Q2 184 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 TMEM99Q8N816 258 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 RCBTB1Q8NDN9 531 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 OR4N2Q8NGD1 307 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 OR51A7Q8NH64 312 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 OIT3Q8WWZ8 545 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 ACOT12Q8WYK0 555 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 AHCYL2Q96HN2 611 aaKnown RBP14.15□□□□□ -0.14
USH1C-207ENST00000527720 DCLRE1CQ96SD1 692 aaKnown RBP14.15□□□□□ -0.14
USH1C-207ENST00000527720 MAP3K3Q99759 626 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 ATF6BQ99941 703 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 SOSTQ9BQB4 213 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 NDC1Q9BTX1 674 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 RBCK1Q9BYM8 510 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 CHRNA10Q9GZZ6 450 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 SLC22A4Q9H015 551 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 CHRDQ9H2X0 955 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 RPS6KB2Q9UBS0 482 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 SERTAD3Q9UJW9 196 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 ADAM30Q9UKF2 790 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 PLCL2Q9UPR0 1127 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 CLDN16Q9Y5I7 305 aa14.15□□□□□ -0.14
USH1C-207ENST00000527720 ADAM11O75078 769 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 CSF3P09919 207 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 SBK2P0C263 348 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 CHRNB1P11230 501 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 NME1P15531 152 aaKnown RBP14.14□□□□□ -0.15
USH1C-207ENST00000527720 F8A1P23610 371 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 GABRA4P48169 554 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 RFX2P48378 723 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 OR2B6P58173 313 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 RPS7P62081 194 aaKnown RBP14.14□□□□□ -0.15
USH1C-207ENST00000527720 RIN1Q13671 783 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 ZNF267Q14586 743 aaPredicted RBP14.14□□□□□ -0.15
USH1C-207ENST00000527720 ZNF544Q6NX49 715 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 NPSR1Q6W5P4 371 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 UBQLNLQ8IYU4 475 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 TSTD1Q8NFU3 115 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 MCCC2Q9HCC0 563 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 HEATR5AQ86XA9 2040 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 SPTBP11277 2137 aa14.14□□□□□ -0.15
USH1C-207ENST00000527720 IGHV1OR15-9A0A0B4J2B8 117 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 TMEM221A6NGB7 291 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 SSX4O60224 188 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 CT45A8P0DMV1 189 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 CT45A9P0DMV2 189 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 FHL1Q13642 323 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.13□□□□□ -0.15
USH1C-207ENST00000527720 CT45A2Q5DJT8 189 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 TCTE1Q5JU00 501 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 GATAD2AQ86YP4 633 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 RAB43Q86YS6 212 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 OR10H4Q8NGA5 316 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 TNFRSF13CQ96RJ3 184 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 ADGRL4Q9HBW9 690 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 MKKSQ9NPJ1 570 aaPredicted RBP14.13□□□□□ -0.15
USH1C-207ENST00000527720 COMMD3Q9UBI1 195 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 DTX4Q9Y2E6 619 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 SLCO1B1Q9Y6L6 691 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 ZC3H12DA2A288 527 aaKnown RBP14.13□□□□□ -0.15
USH1C-207ENST00000527720 HTR3EA5X5Y0 456 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 CD8B2A6NJW9 211 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 HRKO00198 91 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 PLPP2O43688 288 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 ATP6V1G1O75348 118 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 PPP1R3DO95685 299 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 HLA-DQB1P01920 261 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 NGFRP08138 427 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 CD8BP10966 210 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 SRFP11831 508 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 NOS3P29474 1203 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 CRYZQ08257 329 aaKnown RBP14.13□□□□□ -0.15
USH1C-207ENST00000527720 SERTAD2Q14140 314 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 CRMP1Q14194 572 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 PYDC2Q56P42 97 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 B3GLCTQ6Y288 498 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 ZNF517Q6ZMY9 492 aaPredicted RBP14.13□□□□□ -0.15
USH1C-207ENST00000527720 SPATC1Q76KD6 591 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 ZNF440Q8IYI8 595 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 OR5W2Q8NH69 310 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 ITFG2Q969R8 447 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 CCNL2Q96S94 520 aaPredicted RBP14.13□□□□□ -0.15
USH1C-207ENST00000527720 OR10A5Q9H207 317 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 OR51V1Q9H2C8 321 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 PRODH2Q9UF12 536 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 EPHA6Q9UF33 1036 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 KLHL21Q9UJP4 597 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 ICAM5Q9UMF0 924 aa14.13□□□□□ -0.15
USH1C-207ENST00000527720 SPTBN5Q9NRC6 3674 aaKnown RBP14.13□□□□□ -0.15
USH1C-207ENST00000527720 H0YIG0 161 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 SLC19A2O60779 497 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms