RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 CACNG6Q9BXT2 260 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 QRSL1Q9H0R6 528 aaKnown RBP21.16■□□□□ 0.98
USP47-205ENST00000525257 SMIM23A6NLE4 172 aa21.15■□□□□ 0.98
USP47-205ENST00000525257 TMEM114B3SHH9 223 aa21.15■□□□□ 0.98
USP47-205ENST00000525257 ZNF264O43296 627 aa21.15■□□□□ 0.98
USP47-205ENST00000525257 C6orf47O95873 294 aa21.15■□□□□ 0.98
USP47-205ENST00000525257 SHBGP04278 402 aa21.15■□□□□ 0.98
USP47-205ENST00000525257 KRT16P08779 473 aa21.15■□□□□ 0.98
USP47-205ENST00000525257 COX5AP20674 150 aa21.15■□□□□ 0.98
USP47-205ENST00000525257 IRX1P78414 480 aaPredicted RBP21.15■□□□□ 0.98
USP47-205ENST00000525257 CBFBQ13951 182 aa21.15■□□□□ 0.98
USP47-205ENST00000525257 PCLAFQ15004 111 aa21.15■□□□□ 0.98
USP47-205ENST00000525257 TIGD2Q4W5G0 525 aa21.15■□□□□ 0.98
USP47-205ENST00000525257 C6orf52Q5T4I8 152 aa21.15■□□□□ 0.98
USP47-205ENST00000525257 GSPT2Q8IYD1 628 aaKnown RBP21.15■□□□□ 0.98
USP47-205ENST00000525257 ZNF75CPQ92670 426 aaPredicted RBP21.15■□□□□ 0.98
USP47-205ENST00000525257 ADAD1Q96M93 576 aaKnown RBP21.15■□□□□ 0.98
USP47-205ENST00000525257 NUP214P35658 2090 aaPredicted RBP21.14■□□□□ 0.98
USP47-205ENST00000525257 FAM234BA2RU67 622 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 OR5H1A6NKK0 313 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 ZNF724A8MTY0 619 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 ESPNB1AK53 854 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 PIP5K1BO14986 540 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 EIF4E2O60573 245 aaKnown RBP21.14■□□□□ 0.97
USP47-205ENST00000525257 CYP7B1O75881 506 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 CHRNGP07510 517 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 RPL3P39023 403 aaKnown RBP21.14■□□□□ 0.97
USP47-205ENST00000525257 PTGR1Q14914 329 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 PDZK1Q5T2W1 519 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 GALNT5Q7Z7M9 940 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 C4orf33Q8N1A6 199 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 OR5D16Q8NGK9 328 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 OR5AK3PQ8NH89 298 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 PSMA8Q8TAA3 256 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 HTRA1Q92743 480 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 OR7D2Q96RA2 312 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 TRMOQ9BU70 441 aa21.14■□□□□ 0.97
USP47-205ENST00000525257 A0A096LNT2 108 aa21.13■□□□□ 0.97
USP47-205ENST00000525257 ETV2O00321 342 aaPredicted RBP21.13■□□□□ 0.97
USP47-205ENST00000525257 PHF1O43189 567 aaPredicted RBP21.13■□□□□ 0.97
USP47-205ENST00000525257 RAD51DO75771 328 aa21.13■□□□□ 0.97
USP47-205ENST00000525257 PGM3O95394 542 aa21.13■□□□□ 0.97
USP47-205ENST00000525257 IGHV3-9P01782 118 aa21.13■□□□□ 0.97
USP47-205ENST00000525257 MAPK1P28482 360 aa21.13■□□□□ 0.97
USP47-205ENST00000525257 SPOCK1Q08629 439 aa21.13■□□□□ 0.97
USP47-205ENST00000525257 ARL13AQ5H913 290 aaPredicted RBP21.13■□□□□ 0.97
USP47-205ENST00000525257 CLEC2AQ6UVW9 174 aa21.13■□□□□ 0.97
USP47-205ENST00000525257 P2RY8Q86VZ1 359 aa21.13■□□□□ 0.97
USP47-205ENST00000525257 ZNF433Q8N7K0 673 aaPredicted RBP21.13■□□□□ 0.97
USP47-205ENST00000525257 ARL8AQ96BM9 186 aa21.13■□□□□ 0.97
USP47-205ENST00000525257 C1orf50Q9BV19 199 aa21.13■□□□□ 0.97
USP47-205ENST00000525257 THUMPD3Q9BV44 507 aaKnown RBP21.13■□□□□ 0.97
USP47-205ENST00000525257 MID2Q9UJV3 735 aa21.13■□□□□ 0.97
USP47-205ENST00000525257 POU2F3Q9UKI9 436 aa21.13■□□□□ 0.97
USP47-205ENST00000525257 SERINC4A6NH21 518 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 E7EQL1 145 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 TRIM13O60858 407 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 PEX11AO75192 247 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 FAM157CP0CG43 387 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 KRT4P19013 534 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 DIO1P49895 249 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 ZNF83P51522 516 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 TMEM249Q2WGJ8 235 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 UGT3A2Q3SY77 523 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 C11orf71Q6IPW1 123 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 SLC22A25Q6T423 547 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 SSX8Q7RTT4 187 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 UBE2J2Q8N2K1 259 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 OR10H5Q8NGA6 315 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 OR52N5Q8NH56 324 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 AGR3Q8TD06 166 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 SFXN5Q8TD22 340 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 RADILQ96JH8 1075 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 PPP3R2Q96LZ3 170 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 RHOXF2Q9BQY4 288 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 ATAD3AQ9NVI7 634 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 TRAF6Q9Y4K3 522 aa21.12■□□□□ 0.97
USP47-205ENST00000525257 GOLGA8QA0A0J9YX86 632 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 GOLGA8OA6NCC3 632 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 GOLGA8NF8WBI6 632 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 CFLARO15519 480 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 TTKP33981 857 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 SOAT1P35610 550 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 RPS26P62854 115 aaKnown RBP21.11■□□□□ 0.97
USP47-205ENST00000525257 CHRNEQ04844 493 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 MERTKQ12866 999 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 SKP2Q13309 424 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 GPR68Q15743 365 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 LSM12Q3MHD2 195 aaKnown RBP21.11■□□□□ 0.97
USP47-205ENST00000525257 TMEM108Q6UXF1 575 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 OLIG3Q7RTU3 272 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 KRTCAP2Q8N6L1 136 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 ST8SIA1Q92185 356 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 TNFRSF13CQ96RJ3 184 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 SDF2Q99470 211 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 DHRS9Q9BPW9 319 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 CBLN4Q9NTU7 201 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 EMC3Q9P0I2 261 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 CDC42EP3Q9UKI2 254 aa21.11■□□□□ 0.97
USP47-205ENST00000525257 NBEAL1Q6ZS30 2694 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms