RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 RRAGDQ9NQL2 400 aaPredicted RBP6.97□□□□□ -1.29
NSMCE2-213ENST00000523824 SERINC1Q9NRX5 453 aa6.97□□□□□ -1.29
NSMCE2-213ENST00000523824 ASB6Q9NWX5 421 aa6.97□□□□□ -1.29
NSMCE2-213ENST00000523824 EMC3Q9P0I2 261 aa6.97□□□□□ -1.29
NSMCE2-213ENST00000523824 TMEM216Q9P0N5 145 aa6.97□□□□□ -1.29
NSMCE2-213ENST00000523824 SH3BP4Q9P0V3 963 aa6.97□□□□□ -1.29
NSMCE2-213ENST00000523824 ICAM5Q9UMF0 924 aa6.97□□□□□ -1.29
NSMCE2-213ENST00000523824 NOSIPQ9Y314 301 aaKnown RBP6.97□□□□□ -1.29
NSMCE2-213ENST00000523824 ACTL7BQ9Y614 415 aa6.97□□□□□ -1.29
NSMCE2-213ENST00000523824 FREM1Q5H8C1 2179 aa6.96□□□□□ -1.29
NSMCE2-213ENST00000523824 NPIPA5A0A0B4J1W7 369 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 LOC390937A0A1W2PQ73 354 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 NPIPA7E9PJI5 369 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 SULT2B1O00204 365 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 AKAP10O43572 662 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 SEC22BO75396 215 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 RSL1D1O76021 490 aaKnown RBP6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 GSTA1P08263 222 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 SNRPAP09012 282 aaKnown RBP6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 NPIPA8P0DM63 369 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 ZNF23P17027 643 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 DIO1P49895 249 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 CCR4P51679 360 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 PRKAA2P54646 552 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 FOXA1P55317 472 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 CSNK2A1P68400 391 aaPredicted RBP6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 PHC1P78364 1004 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 CBFBQ13951 182 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 GABRA6Q16445 453 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 TIGD2Q4W5G0 525 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 KLHL26Q53HC5 615 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 SLC25A53Q5H9E4 307 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 C3orf33Q6P1S2 294 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 BHLHB9Q6PI77 547 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 TMPPEQ6ZT21 453 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 TRIM46Q7Z4K8 759 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 TMCO5AQ8N6Q1 288 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 CCNYL1Q8N7R7 359 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 ZNF614Q8N883 585 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 TOR1AIP2Q8NFQ8 470 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 OR5W2Q8NH69 310 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 CDS1Q92903 461 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 PPCDCQ96CD2 204 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 MUS81Q96NY9 551 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 SORCS2Q96PQ0 1159 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 VRK1Q99986 396 aaPredicted RBP6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 PIGUQ9H490 435 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 TAS2R16Q9NYV7 291 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 TMEFF2Q9UIK5 374 aaPredicted RBP6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 TRAF6Q9Y4K3 522 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 YLPM1P49750 1951 aaKnown RBP6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 PLCE1Q9P212 2302 aa6.96□□□□□ -1.3
NSMCE2-213ENST00000523824 MALRD1Q5VYJ5 2156 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 LRP5LA4QPB2 252 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 GPR171O14626 319 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 ZNF264O43296 627 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 EIF4E2O60573 245 aaKnown RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 MRPL33O75394 65 aaKnown RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 CYP7B1O75881 506 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 H6PDO95479 791 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 HMGN2P05204 90 aaKnown RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 TFPIP10646 304 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 ATP12AP54707 1039 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 SNRPD2P62316 118 aaKnown RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 SLC7A5Q01650 507 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 MERTKQ12866 999 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 LASP1Q14847 261 aaKnown RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 PDK3Q15120 406 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 QPRTQ15274 297 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 SWI5Q1ZZU3 235 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 MST1LQ2TV78 715 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 NDUFAF6Q330K2 333 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 ZNF385BQ569K4 471 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 C9orf135Q5VTT2 229 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 CDC73Q6P1J9 531 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 SLC46A3Q7Z3Q1 461 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 MTDHQ86UE4 582 aaKnown RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 WDR31Q8NA23 367 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 ADAMTS15Q8TE58 950 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 DCAKDQ8WVC6 231 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 ZHX1-C8orf76Q96EF9 292 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 FAM120BQ96EK7 910 aaKnown RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 L3HYPDHQ96EM0 354 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 METTL2AQ96IZ6 378 aaKnown RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 STACQ99469 402 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 FUT8Q9BYC5 575 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 BHLHE41Q9C0J9 482 aaPredicted RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 QRSL1Q9H0R6 528 aaKnown RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 KCNF1Q9H3M0 494 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 CDC42EP4Q9H3Q1 356 aaKnown RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 GSTO2Q9H4Y5 243 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 REEP4Q9H6H4 257 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 ANKZF1Q9H8Y5 726 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 MYOZ1Q9NP98 299 aaPredicted RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 DUSP22Q9NRW4 184 aa6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 ACSS1Q9NUB1 689 aaPredicted RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 ZCCHC3Q9NUD5 404 aaKnown RBP6.95□□□□□ -1.3
NSMCE2-213ENST00000523824 ZDHHC18Q9NUE0 388 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms