RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 UNC13CQ8NB66 2214 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 FCMRO60667 390 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 KDM4BO94953 1096 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 MYF5P13349 255 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 GLULP15104 373 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 DCAF7P61962 342 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 DCDP81605 110 aaKnown RBP12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 SMCO1Q147U7 214 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 SAXO2Q658L1 398 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 BORAQ6PGQ7 559 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 RBM24Q9BX46 236 aaKnown RBP12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 SPTY2D1-AS1A0A0U1RR47 76 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 SULT2B1O00204 365 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 PLATP00750 562 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 RAB3BP20337 219 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 PRKAR1BP31321 381 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 PLP2Q04941 152 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 SPEM1Q8N4L4 309 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 LCORQ96JN0 433 aaPredicted RBP12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 INIPQ9NRY2 104 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 PCDHGB6Q9Y5F9 930 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 RP1P56715 2156 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 KIF13BQ9NQT8 1826 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 A0A1W2PQL4 384 aaPredicted RBP12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF208O43345 1280 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 PRKNO60260 465 aaPredicted RBP12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 TACR3P29371 465 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 MANEAQ5SRI9 462 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 CCDC80Q76M96 950 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 GPR137CQ8N3F9 429 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR8S1Q8NH09 359 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 RFT1Q96AA3 541 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 CCDC74AQ96AQ1 378 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 KLHL15Q96M94 604 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 FRMD6Q96NE9 622 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 VNN3Q9NY84 501 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 MYOFQ9NZM1 2061 aa12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 RBBP6Q7Z6E9 1792 aaKnown RBP12.15□□□□□ -0.46
PCDHGB1-201ENST00000523390 TPRP12270 2363 aaKnown RBP12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 APC2O95996 2303 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC16A7O60669 478 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 GALR3O60755 368 aaPredicted RBP12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 MRPS14O60783 128 aaKnown RBP12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 CBX5P45973 191 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 VASPP50552 380 aaPredicted RBP12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 SQSTM1Q13501 440 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 GXYLT1Q4G148 440 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 GDF7Q7Z4P5 450 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 PAQR7Q86WK9 346 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 PTOV1Q86YD1 416 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 ENTHD1Q8IYW4 607 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 LSM14AQ8ND56 463 aaKnown RBP12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 OR4C15Q8NGM1 316 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 C15orf40Q8WUR7 153 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 CNRIP1Q96F85 164 aaPredicted RBP12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC35A4Q96G79 324 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 KATNB1Q9BVA0 655 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 TMPRSS11EQ9UL52 423 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 FARSAQ9Y285 508 aaKnown RBP12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF337Q9Y3M9 751 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 GRIP1Q9Y3R0 1128 aa12.15□□□□□ -0.47
PCDHGB1-201ENST00000523390 CNOT1A5YKK6 2376 aaKnown RBP12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 HTR3EA5X5Y0 456 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 A8MV72 311 aaPredicted RBP12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 C5orf67F2Z3F1 127 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 G3V3Y1 287 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 VAMP1P23763 118 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC14A1Q13336 389 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 ILKQ13418 452 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 DCDC5Q6ZRR9 648 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 ALDH16A1Q8IZ83 802 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 OR8H1Q8NGG4 311 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 OR5W2Q8NH69 310 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 NRTNQ99748 197 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 WSB2Q9NYS7 404 aaPredicted RBP12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 RNF215Q9Y6U7 377 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 ASPDHA6ND91 283 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 OR2W5A6NFC9 320 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC19A2O60779 497 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF28P17035 718 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 MMP11P24347 488 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 BTG2P78543 158 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 TIAL1Q01085 375 aaKnown RBP eCLIP12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 VWA2Q5GFL6 755 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 TMEM69Q5SWH9 247 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 TMEM53Q6P2H8 277 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 CDH24Q86UP0 819 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 SP7Q8TDD2 431 aaPredicted RBP12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 C19orf53Q9UNZ5 99 aaPredicted RBP12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 OR6C70A6NIJ9 312 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC16A6O15403 523 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 TPD52L2O43399 206 aaKnown RBP12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 UTS2O95399 124 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 PTHP01270 115 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 AQP2P41181 271 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 HSD17B7P56937 341 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 ADARB1P78563 741 aaKnown RBP12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 HES5Q5TA89 166 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 KDM4DQ6B0I6 523 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 MBOAT2Q6ZWT7 520 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms