RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CYP7B1O75881 506 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 CYBBP04839 570 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 RPN2P04844 631 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 DUX4L2P0CJ85 424 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 DUX4L3P0CJ86 424 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 DUX4L4P0CJ87 422 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 DUX4L5P0CJ88 424 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 DUX4L6P0CJ89 424 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 DUX4L7P0CJ90 424 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 RPA2P15927 270 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 RHOQP17081 205 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 CD58P19256 250 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 RAB3BP20337 219 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 SAT1P21673 171 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 MYF6P23409 242 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 ACP1P24666 158 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 ADORA2BP29275 332 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 MPLP40238 635 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 GPR12P47775 334 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 MRPL19P49406 292 aaKnown RBP7□□□□□ -1.29
HDAC3-216ENST00000523088 ARRB1P49407 418 aaPredicted RBP7□□□□□ -1.29
HDAC3-216ENST00000523088 PPOXP50336 477 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 RAB9AP51151 201 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 SUOXP51687 545 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 DLX5P56178 289 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 PITPNAQ00169 270 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 FOXM1Q08050 763 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 PNOCQ13519 176 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 GPR50Q13585 617 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 KRT33BQ14525 404 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 PTGES3Q15185 160 aaKnown RBP7□□□□□ -1.29
HDAC3-216ENST00000523088 OR4D1Q15615 310 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 HIST2H2ACQ16777 129 aaPredicted RBP7□□□□□ -1.29
HDAC3-216ENST00000523088 DGUOKQ16854 277 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 HYAL4Q2M3T9 481 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 TMEM249Q2WGJ8 235 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 PLK5Q496M5 336 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 VPS26BQ4G0F5 336 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 C4orf17Q53FE4 359 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 SOWAHCQ53LP3 525 aaPredicted RBP7□□□□□ -1.29
HDAC3-216ENST00000523088 PIGGQ5H8A4 983 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 LY6G5CQ5SRR4 150 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 C1orf220Q5T0J3 134 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 OR2G6Q5TZ20 316 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 MARC1Q5VT66 337 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 CDCP2Q5VXM1 449 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 DMRTA1Q5VZB9 504 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 NCR3LG1Q68D85 454 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 KDM4DQ6B0I6 523 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 REEP3Q6NUK4 255 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 ESRP1Q6NXG1 681 aaKnown RBP7□□□□□ -1.29
HDAC3-216ENST00000523088 RHBDF2Q6PJF5 856 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 C16orf89Q6UX73 402 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 H1FNTQ75WM6 255 aaPredicted RBP7□□□□□ -1.29
HDAC3-216ENST00000523088 PRSS48Q7RTY5 328 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 AMIGO2Q86SJ2 522 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 RTN4RL2Q86UN3 420 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 RANBP3LQ86VV4 465 aaPredicted RBP7□□□□□ -1.29
HDAC3-216ENST00000523088 LRRC28Q86X40 367 aaPredicted RBP7□□□□□ -1.29
HDAC3-216ENST00000523088 DCUN1D3Q8IWE4 304 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 ETFBKMTQ8IXQ9 262 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 MIER2Q8N344 545 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 CLDN22Q8N7P3 220 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 C19orf47Q8N9M1 422 aaKnown RBP7□□□□□ -1.29
HDAC3-216ENST00000523088 ENGASEQ8NFI3 743 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 OR51L1Q8NGJ5 315 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 OR4A15Q8NGL6 344 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 OR11L1Q8NGX0 322 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 OR5J2Q8NH18 312 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 SCAMP5Q8TAC9 235 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 CD200R1Q8TD46 325 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 SCARB1Q8WTV0 552 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 EXTL1Q92935 676 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 PLD4Q96BZ4 506 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 CMTM7Q96FZ5 175 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 C5orf30Q96GV9 206 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 APIPQ96GX9 242 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 SIGLEC10Q96LC7 697 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 COQ10AQ96MF6 247 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 Q96MT0 163 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 HHIPQ96QV1 700 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 PCDHB18PQ96TA0 734 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 GPA33Q99795 319 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 FICDQ9BVA6 458 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 REG4Q9BYZ8 158 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 LINC00597Q9H2U6 94 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 ZFYVE1Q9HBF4 777 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 ZFP64Q9NPA5 681 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 FZD3Q9NPG1 666 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7□□□□□ -1.29
HDAC3-216ENST00000523088 TMEM30AQ9NV96 361 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 C14orf105Q9NVL8 296 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 DUX4Q9UBX2 424 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 PCYOX1Q9UHG3 505 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 NAGPAQ9UK23 515 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 ALG6Q9Y672 507 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 ABCA7Q8IZY2 2146 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 CKAP5Q14008 2032 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 TMEM213A2RRL7 107 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 HHLA1C9JL84 531 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms