RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 CCDC88CQ9P219 2028 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 IGLV3-12A0A075B6K2 115 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 A0A096LPI6 279 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 IGHV3-20A0A0C4DH32 117 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 MED19A0JLT2 244 aaPredicted RBP6.22□□□□□ -1.41
PVT1-214ENST00000522875 ASPDHA6ND91 283 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 NPIPB13A6NJU9 1138 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 NPIPB5A8MRT5 1133 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 CDRT15L2A8MXV6 281 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 IDSB3KWA1 339 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 NPIPB4C9JG80 1138 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 EMC8O43402 210 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 SCN2BO60939 215 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 IGHEP01854 428 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 RAB40ALP0C0E4 278 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 SLC35E2P0CK97 266 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 T-ENOLP0DO92 83 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 CHI3L1P36222 383 aaPredicted RBP6.22□□□□□ -1.41
PVT1-214ENST00000522875 CDKN2CP42773 168 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 TRPC1P48995 793 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 CCT3P49368 545 aaKnown RBP6.22□□□□□ -1.41
PVT1-214ENST00000522875 RASSF2P50749 326 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 MNAT1P51948 309 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 PSME3P61289 254 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 HBA1P69905 142 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 RHAGQ02094 409 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 LRRC74AQ0VAA2 488 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 CAPRIN1Q14444 709 aaKnown RBP6.22□□□□□ -1.41
PVT1-214ENST00000522875 TGIF1Q15583 401 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 SFT2D3Q587I9 215 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 FAM69BQ5VUD6 431 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 MTFR2Q6P444 385 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 TMEM107Q6UX40 140 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 ANGPTL8Q6UXH0 198 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 DGAT2L6Q6ZPD8 337 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 LANCL3Q6ZV70 420 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 MDGA2Q7Z553 956 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 UEVLDQ8IX04 471 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 ST13P4Q8IZP2 240 aaPredicted RBP6.22□□□□□ -1.41
PVT1-214ENST00000522875 C7orf57Q8NEG2 295 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 OR5AK3PQ8NH89 298 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 GTF2H4Q92759 462 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 RIT1Q92963 219 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 KIAA1143Q96AT1 154 aaPredicted RBP6.22□□□□□ -1.41
PVT1-214ENST00000522875 C8orf44Q96CB5 159 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 LRRC58Q96CX6 371 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 ZNF578Q96N58 590 aaPredicted RBP6.22□□□□□ -1.41
PVT1-214ENST00000522875 CCDC115Q96NT0 180 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 AMDHD1Q96NU7 426 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 SLC35A5Q9BS91 424 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 KRTAP4-11Q9BYQ6 195 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 PAIP1Q9H074 479 aaKnown RBP6.22□□□□□ -1.41
PVT1-214ENST00000522875 SLC26A1Q9H2B4 701 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 GPN2Q9H9Y4 310 aaPredicted RBP6.22□□□□□ -1.41
PVT1-214ENST00000522875 C3orf14Q9HBI5 128 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 ASCL3Q9NQ33 180 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 SLC52A3Q9NQ40 469 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 ACSS1Q9NUB1 689 aaPredicted RBP6.22□□□□□ -1.41
PVT1-214ENST00000522875 TAS2R9Q9NYW1 312 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 ADA2Q9NZK5 511 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 GTF2A1LQ9UNN4 478 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 CLCA3PQ9Y6N3 262 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 ACACBO00763 2458 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 NUP210LQ5VU65 1888 aa6.22□□□□□ -1.41
PVT1-214ENST00000522875 FER1L5A0AVI2 2057 aa6.21□□□□□ -1.41
PVT1-214ENST00000522875 RNF103-CHMP3A0A140T963 221 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 EVPLLA8MZ36 301 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 C17orf105B2RV13 164 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 C21orf140B9A014 251 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 GYG2O15488 501 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 KRT75O95678 551 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 KRT16P08779 473 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 CT62P0C5K7 136 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 LIPCP11150 499 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 UQCRC2P22695 453 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 F8A1P23610 371 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 PTPN4P29074 926 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 FRKP42685 505 aaPredicted RBP6.21□□□□□ -1.42
PVT1-214ENST00000522875 EFNA3P52797 238 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 CASP9P55211 416 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 IGLV3-21P80748 117 aaPredicted RBP6.21□□□□□ -1.42
PVT1-214ENST00000522875 FOXF2Q12947 444 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 EXOSC7Q15024 291 aaKnown RBP6.21□□□□□ -1.42
PVT1-214ENST00000522875 CEBPEQ15744 281 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 TRMT5Q32P41 509 aaKnown RBP6.21□□□□□ -1.42
PVT1-214ENST00000522875 TRMT12Q53H54 448 aaKnown RBP6.21□□□□□ -1.42
PVT1-214ENST00000522875 RUNDC3AQ59EK9 446 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 COQ5Q5HYK3 327 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 PAPD4Q6PIY7 484 aaKnown RBP6.21□□□□□ -1.42
PVT1-214ENST00000522875 ZNF517Q6ZMY9 492 aaPredicted RBP6.21□□□□□ -1.42
PVT1-214ENST00000522875 C6orf120Q7Z4R8 191 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 CPEB2Q7Z5Q1 589 aaKnown RBP6.21□□□□□ -1.42
PVT1-214ENST00000522875 ANKRD37Q7Z713 158 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 VASH2Q86V25 355 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 TMEM200AQ86VY9 491 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 RAB43Q86YS6 212 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 DEFB107AQ8IZN7 70 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 GALNT16Q8N428 558 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 DPP10Q8N608 796 aa6.21□□□□□ -1.42
PVT1-214ENST00000522875 TRIML2Q8N7C3 387 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms