RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 LRRTM2O43300 516 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 F13BP05160 661 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 SRFP11831 508 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 PSMB10P40306 273 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 GUCA1AP43080 201 aaPredicted RBP9.4□□□□□ -0.91
MCF2-209ENST00000520602 PLK5Q496M5 336 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 NXNL2Q5VZ03 156 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 PTCRAQ6ISU1 281 aaPredicted RBP9.4□□□□□ -0.91
MCF2-209ENST00000520602 ZCCHC12Q6PEW1 402 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 NLGN4YQ8NFZ3 816 aaPredicted RBP9.4□□□□□ -0.91
MCF2-209ENST00000520602 OR4Q3Q8NH05 313 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 TSEN15Q8WW01 171 aaKnown RBP9.4□□□□□ -0.91
MCF2-209ENST00000520602 FN3KQ9H479 309 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 ANKRD19PQ9H560 264 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 FBXO8Q9NRD0 319 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 C20orf141Q9NUB4 165 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 SOX1O00570 391 aaPredicted RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 RNF13O43567 381 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 THBS1P07996 1170 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 HBQ1P09105 142 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 CXCL12P48061 93 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 OR12D2P58182 307 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 RACK1P63244 317 aaKnown RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 TEKQ02763 1124 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 CNIH2Q6PI25 160 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 UBE2Q1Q7Z7E8 422 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 COMTD1Q86VU5 262 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 KIF18BQ86Y91 864 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 GPALPP1Q8IXQ4 340 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 RNF113BQ8IZP6 322 aaKnown RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 SDR16C5Q8N3Y7 309 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 DNAJA4Q8WW22 397 aaPredicted RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 STACQ99469 402 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 ARHGDIGQ99819 225 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 PELOQ9BRX2 385 aaKnown RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 GTPBP2Q9BX10 602 aaKnown RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 TCF7L1Q9HCS4 588 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 RPRD1BQ9NQG5 326 aaKnown RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 KLF15Q9UIH9 416 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 ABCA7Q8IZY2 2146 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 A0A1W2PQ09 198 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 SERINC4A6NH21 518 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 GABRPO00591 440 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 BCAT2O15382 392 aaPredicted RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 HPGDSO60760 199 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 RGS9O75916 674 aaPredicted RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 DCNP07585 359 aaKnown RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 HOXC4P09017 264 aaPredicted RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 ARFIP1P53367 373 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 CD83Q01151 205 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 FUT5Q11128 374 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 SSX1Q16384 188 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 CHMP1BQ7LBR1 199 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 LYSMD2Q8IV50 215 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 C16orf52Q8NHV5 167 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 CNN2Q99439 309 aaKnown RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 MMP28Q9H239 520 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 CDHR4A6H8M9 788 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 CDC42EP2O14613 210 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 MAGEB4O15481 346 aaPredicted RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 PRICKLE3O43900 615 aaPredicted RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 ARL6IP5O75915 188 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 FCER2P06734 321 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 HEXBP07686 556 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 UBL4AP11441 157 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 MAKP20794 623 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 HTR1FP30939 366 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 CCKBRP32239 447 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 NUDT1P36639 197 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 FRKP42685 505 aaPredicted RBP9.39□□□□□ -0.91
MCF2-209ENST00000520602 EMDP50402 254 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 PPP3R1P63098 170 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 PRKCDQ05655 676 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 IL20RBQ6UXL0 311 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 ADAMTS18Q8TE60 1221 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 NMNAT3Q96T66 252 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 UBQLN4Q9NRR5 601 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 EPHA6Q9UF33 1036 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 TANC1Q9C0D5 1861 aa9.39□□□□□ -0.91
MCF2-209ENST00000520602 TLCD2A6NGC4 264 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 TVP23AA6NH52 213 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 TMEM229AB2RXF0 380 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 SERPINA3P01011 423 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 IL1AP01583 271 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 IGHV4-34P06331 123 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 HCCSP53701 268 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 ACTC1P68032 377 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 ACTA1P68133 377 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 ZNF628Q5EBL2 1059 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 VWA2Q5GFL6 755 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 ZNF770Q6IQ21 691 aaPredicted RBP9.38□□□□□ -0.91
MCF2-209ENST00000520602 GPR155Q7Z3F1 870 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 ABI3BPQ7Z7G0 1075 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 SLC22A18ASQ8N1D0 253 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 MORN4Q8NDC4 146 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 FBLIM1Q8WUP2 373 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 ZNF764Q96H86 408 aaPredicted RBP9.38□□□□□ -0.91
MCF2-209ENST00000520602 FOXN4Q96NZ1 517 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 KATNB1Q9BVA0 655 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms