RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 SPHK1Q9NYA1 384 aa9.39□□□□□ -0.91
SH2D4A-204ENST00000519207 APOBEC3BQ9UH17 382 aaKnown RBP9.39□□□□□ -0.91
SH2D4A-204ENST00000519207 ADAM30Q9UKF2 790 aa9.39□□□□□ -0.91
SH2D4A-204ENST00000519207 KCNE3Q9Y6H6 103 aa9.39□□□□□ -0.91
SH2D4A-204ENST00000519207 OR6C65A6NJZ3 312 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 UBXN7O94888 489 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 AGR2O95994 175 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 HOXC4P09017 264 aaPredicted RBP9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 SULT1A3P0DMM9 295 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 SULT1A4P0DMN0 295 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 C8orf89P0DMQ9 161 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 NR2F6P10588 404 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 ALPPL2P10696 532 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 STOMP27105 288 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 SDC2P34741 201 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 ETV5P41161 510 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 MC3RP41968 323 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 RPS15AP62244 130 aaKnown RBP9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 TPBGQ13641 420 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 DECR1Q16698 335 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 ITPRIPL2Q3MIP1 535 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 PLK5Q496M5 336 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 LIPKQ5VXJ0 399 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 PAQR6Q6TCH4 344 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 LAPTM4BQ86VI4 370 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 PAQR7Q86WK9 346 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 LILRB2Q8N423 598 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 OR14C36Q8NHC7 312 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 PIGXQ8TBF5 258 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 OR2M2Q96R28 347 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 GFM1Q96RP9 751 aaKnown RBP9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 C12orf57Q99622 126 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 PLA2G12AQ9BZM1 189 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 PLA2G2FQ9BZM2 168 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 SAP130Q9H0E3 1048 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 EXOSC1Q9Y3B2 195 aaKnown RBP9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 SF3B6Q9Y3B4 125 aaKnown RBP9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 KMT2EQ8IZD2 1858 aa9.38□□□□□ -0.91
SH2D4A-204ENST00000519207 KDM4EB2RXH2 506 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 APOC1P02654 83 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 S100A6P06703 90 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 CHRM5P08912 532 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 FPR3P25089 353 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 FGF9P31371 208 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 STAT5AP42229 794 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 KIR2DL1P43626 348 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 OMPP47874 163 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 MTNR1AP48039 350 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 RAB8AP61006 207 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 BTN3A2P78410 334 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 LSM11P83369 360 aaKnown RBP eCLIP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 GPR176Q14439 515 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 HEPHL1Q6MZM0 1159 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 CD200R1LQ6Q8B3 271 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 MTSS1LQ765P7 747 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 PRICKLE2Q7Z3G6 844 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 HSD17B13Q7Z5P4 300 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 OR9A2Q8NGT5 310 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 CEP76Q8TAP6 659 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 NT5CQ8TCD5 201 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 GANCQ8TET4 914 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 ACOT11Q8WXI4 607 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 ASB12Q8WXK4 309 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 ST8SIA2Q92186 375 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 OSTF1Q92882 214 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 NXPE2Q96DL1 559 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 RNFT2Q96EX2 444 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 OR2M4Q96R27 311 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 NELL2Q99435 816 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 TRMT61BQ9BVS5 477 aaKnown RBP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 TEX12Q9BXU0 123 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 MS4A7Q9GZW8 240 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 QRSL1Q9H0R6 528 aaKnown RBP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 EGLN3Q9H6Z9 239 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 FBRSQ9HAH7 460 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 PRDM9Q9NQV7 894 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 DLL4Q9NR61 685 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 MED17Q9NVC6 651 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 FAM86C1Q9NVL1 165 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 HPF1Q9NWY4 346 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 KLF15Q9UIH9 416 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 ING1Q9UK53 422 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 ATG2BQ96BY7 2078 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 PTPRZ1P23471 2315 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 TBC1D3KA0A087X1G2 549 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 A0A1W2PS29 197 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 PRSS38A1L453 326 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 TBC1D3FA6NER0 549 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 ISM1B1AKI9 464 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 WWP2O00308 870 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 NMBP08949 121 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 CXCL3P19876 107 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 PTGER1P34995 402 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 ATP12AP54707 1039 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 ADPRHP54922 357 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 RAG2P55895 527 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 FAM209BQ5JX69 171 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 TBC1D3GQ6DHY5 549 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 CDC73Q6P1J9 531 aa9.37□□□□□ -0.91
SH2D4A-204ENST00000519207 HMGN2P46Q86SG4 172 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms