RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 KLHL9Q9P2J3 617 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 GOLGA8QA0A0J9YX86 632 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 A0A1W2PNR3 127 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 GOLGA8OA6NCC3 632 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 CCDC154A6NI56 674 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 GOLGA8NF8WBI6 632 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 SDHDO14521 159 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 ANKRD28O15084 1053 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 SIAH2O43255 324 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 KIAA0513O60268 411 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 NTN1O95631 604 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 TFPIP10646 304 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 PSMB1P20618 241 aaKnown RBP12.18□□□□□ -0.46
TCOF1-215ENST00000515516 IL32P24001 234 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 SESN3P58005 492 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 CSNK2A1P68400 391 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-215ENST00000515516 SKP2Q13309 424 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 GNA13Q14344 377 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 TYW3Q6IPR3 259 aaKnown RBP12.18□□□□□ -0.46
TCOF1-215ENST00000515516 ALKBH2Q6NS38 261 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 ZNF621Q6ZSS3 439 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 OLIG3Q7RTU3 272 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 ARFGAP2Q8N6H7 521 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 GLB1L3Q8NCI6 653 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-215ENST00000515516 RAB3IL1Q8TBN0 382 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 SLC25A43Q8WUT9 341 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-215ENST00000515516 OR52E6Q96RD3 313 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 QRSL1Q9H0R6 528 aaKnown RBP12.18□□□□□ -0.46
TCOF1-215ENST00000515516 MANSC1Q9H8J5 431 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 NGBQ9NPG2 151 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 AIG1Q9NVV5 245 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 KCNE5Q9UJ90 142 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 LIPT1Q9Y234 373 aa12.18□□□□□ -0.46
TCOF1-215ENST00000515516 IGHV3-15A0A0B4J1V0 119 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 ETV2O00321 342 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-215ENST00000515516 KRT75O95678 551 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 PGRP06401 933 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 ALDOCP09972 364 aaKnown RBP12.17□□□□□ -0.46
TCOF1-215ENST00000515516 IDO1P14902 403 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 FKBP2P26885 142 aaKnown RBP12.17□□□□□ -0.46
TCOF1-215ENST00000515516 EPHA3P29320 983 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 HOXC12P31275 282 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 RYKP34925 604 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 PGM1P36871 562 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 APOBEC1P41238 236 aaKnown RBP12.17□□□□□ -0.46
TCOF1-215ENST00000515516 SLC18A1P54219 525 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 WDR4P57081 412 aaKnown RBP12.17□□□□□ -0.46
TCOF1-215ENST00000515516 MAGOHP61326 146 aaKnown RBP12.17□□□□□ -0.46
TCOF1-215ENST00000515516 KCNJ10P78508 379 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 RASGEF1BQ0VAM2 473 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 MAPK14Q16539 360 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 TFAP2EQ6VUC0 442 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 PLEKHM3Q6ZWE6 761 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 NUFIP2Q7Z417 695 aaKnown RBP12.17□□□□□ -0.46
TCOF1-215ENST00000515516 CXorf67Q86X51 503 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-215ENST00000515516 RNF130Q86XS8 419 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 LRRC75A-AS1Q8N1F1 130 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 WFDC11Q8NEX6 87 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 ZHX1-C8orf76Q96EF9 292 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 HS3ST6Q96QI5 342 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 USB1Q9BQ65 265 aaKnown RBP12.17□□□□□ -0.46
TCOF1-215ENST00000515516 SAP130Q9H0E3 1048 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 WDR55Q9H6Y2 383 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-215ENST00000515516 COQ10BQ9H8M1 238 aa12.17□□□□□ -0.46
TCOF1-215ENST00000515516 CENPVL1A0A0U1RR11 272 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-215ENST00000515516 SULT2B1O00204 365 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 DNAJA2O60884 412 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 SNNO75324 88 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-215ENST00000515516 SLC22A3O75751 556 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 H6PDO95479 791 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 ADAP00813 363 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 IL6P05231 212 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 THBDP07204 575 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 NR2F1P10589 423 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 CHRNEQ04844 493 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 CAPRIN1Q14444 709 aaKnown RBP12.16□□□□□ -0.46
TCOF1-215ENST00000515516 P2RY6Q15077 328 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 SYT14P1Q58G82 188 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 SFRP5Q5T4F7 317 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 FRRS1Q6ZNA5 592 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 ZNF704Q6ZNC4 412 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-215ENST00000515516 TMPPEQ6ZT21 453 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 C22orf34Q6ZV56 151 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 GRINAQ7Z429 371 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 HSD17B8Q92506 261 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 KISS1RQ969F8 398 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-215ENST00000515516 S100PBPQ96BU1 408 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 PLPPR2Q96GM1 343 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 MARK4Q96L34 752 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 TEX37Q96LM6 180 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 TRNT1Q96Q11 434 aaKnown RBP12.16□□□□□ -0.46
TCOF1-215ENST00000515516 MTHFD2LQ9H903 347 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-215ENST00000515516 BCO1Q9HAY6 547 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 EXOSC3Q9NQT5 275 aaKnown RBP12.16□□□□□ -0.46
TCOF1-215ENST00000515516 GPR45Q9Y5Y3 372 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 CELSR1Q9NYQ6 3014 aa12.16□□□□□ -0.46
TCOF1-215ENST00000515516 C9JVG2 144 aa12.15□□□□□ -0.46
TCOF1-215ENST00000515516 HMGN4O00479 90 aa12.15□□□□□ -0.46
TCOF1-215ENST00000515516 RFXANKO14593 260 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms