RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 OR7G1Q8NGA0 311 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 OR10H4Q8NGA5 316 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 MRPL48Q96GC5 212 aaKnown RBP13.7□□□□□ -0.22
NUP54-217ENST00000514987 PEX11GQ96HA9 241 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 ATF6BQ99941 703 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 SOSTQ9BQB4 213 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 ORAI3Q9BRQ5 295 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 HOXD1Q9GZZ0 328 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 ENKD1Q9H0I2 346 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 PCED1AQ9H1Q7 454 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 CAPN10Q9HC96 672 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 TIGARQ9NQ88 270 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 SACM1LQ9NTJ5 587 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 HCN3Q9P1Z3 774 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 PCDHGB7Q9Y5F8 929 aa13.7□□□□□ -0.22
NUP54-217ENST00000514987 SCN2AQ99250 2005 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 H0YIG0 161 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 PLPP2O43688 288 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 IGKV1D-16P01601 117 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 HLA-DQB1P01920 261 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 TRAPPC2P0DI81 140 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 TRAPPC2BP0DI82 140 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 NME1P15531 152 aaKnown RBP13.69□□□□□ -0.22
NUP54-217ENST00000514987 FUT1P19526 365 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 CD27P26842 260 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 NOS3P29474 1203 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 SSTR4P31391 388 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 GPR3P46089 330 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 RFX3P48380 749 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 EVX1P49640 407 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 LGALS3BPQ08380 585 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 COL9A2Q14055 689 aaPredicted RBP13.69□□□□□ -0.22
NUP54-217ENST00000514987 ZNF267Q14586 743 aaPredicted RBP13.69□□□□□ -0.22
NUP54-217ENST00000514987 ZMAT1Q5H9K5 638 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 LCN1P1Q5VSP4 162 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 TMEM91Q6ZNR0 172 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 SDR16C5Q8N3Y7 309 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 TMEM99Q8N816 258 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 OR51A7Q8NH64 312 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 OR5W2Q8NH69 310 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 SGTBQ96EQ0 304 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 SLC38A3Q99624 504 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 SLC19A3Q9BZV2 496 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 CHRDQ9H2X0 955 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 ZNF576Q9H609 170 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 MED20Q9H944 212 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 COMMD3Q9UBI1 195 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 ICAM5Q9UMF0 924 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 NOX1Q9Y5S8 564 aa13.69□□□□□ -0.22
NUP54-217ENST00000514987 TRAV27A0A087WT01 109 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 SERINC4A6NH21 518 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 IDH3BO43837 385 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 IGF2P01344 180 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 CSF3P09919 207 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 SRFP11831 508 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 AZGP1P25311 298 aaKnown RBP13.68□□□□□ -0.22
NUP54-217ENST00000514987 MLLT3P42568 568 aaPredicted RBP13.68□□□□□ -0.22
NUP54-217ENST00000514987 RFX2P48378 723 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 MAZP56270 477 aaKnown RBP13.68□□□□□ -0.22
NUP54-217ENST00000514987 FZD5Q13467 585 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 ISXQ2M1V0 245 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.68□□□□□ -0.22
NUP54-217ENST00000514987 ZNF362Q5T0B9 420 aaPredicted RBP13.68□□□□□ -0.22
NUP54-217ENST00000514987 VASNQ6EMK4 673 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 MZT2BQ6NZ67 158 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 PAMR1Q6UXH9 720 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 Q6ZS52 159 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 MS4A15Q8N5U1 240 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 CELF2-AS1Q8N7Q2 184 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 POMGNT2Q8NAT1 580 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 RCBTB1Q8NDN9 531 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 PTCHD1Q96NR3 888 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 DEPDC7Q96QD5 511 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 TNFRSF13CQ96RJ3 184 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 MAP3K3Q99759 626 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 RAB33BQ9H082 229 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 OR10A5Q9H207 317 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 OR51V1Q9H2C8 321 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 ISG20L2Q9H9L3 353 aaKnown RBP13.68□□□□□ -0.22
NUP54-217ENST00000514987 ADGRL4Q9HBW9 690 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 MCCC2Q9HCC0 563 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 OR10H1Q9Y4A9 318 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 MTCH2Q9Y6C9 303 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 CACNA1IQ9P0X4 2223 aa13.68□□□□□ -0.22
NUP54-217ENST00000514987 IGHV1OR15-9A0A0B4J2B8 117 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 FITM1A5D6W6 292 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 TLCD2A6NGC4 264 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 CD8B2A6NJW9 211 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 ATP6V1G1O75348 118 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 RFPL3O75679 317 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 CCNKO75909 580 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 PPP1R3DO95685 299 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 SERPINA3P01011 423 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 CSTAP01040 98 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 KRT8P05787 483 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 CD8BP10966 210 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 CHRNB1P11230 501 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 PTNP21246 168 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 MYL9P24844 172 aa13.67□□□□□ -0.22
NUP54-217ENST00000514987 CD38P28907 300 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms