RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ANGPT4Q9Y264 503 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 CHST2Q9Y4C5 530 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 MBD3L4A6NDZ8 208 aaPredicted RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 MBD3L3A6NE82 208 aaPredicted RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 MBD3L5A6NJ08 208 aaPredicted RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 ETV2O00321 342 aaPredicted RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 CLDN14O95500 239 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 GKN3PP0CG01 181 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 ELK4P28324 431 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 CHRNB4P30926 498 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 CEACAM8P31997 349 aaPredicted RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 SFTPDP35247 375 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 GZMMP51124 257 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 RPS3AP61247 264 aaKnown RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 RBBP4Q09028 425 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 MERTKQ12866 999 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 ART3Q13508 389 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 SGCBQ16585 318 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 TMEM176BQ3YBM2 270 aaPredicted RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 POMZP3Q6PJE2 187 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 MAMDC2Q7Z304 686 aaPredicted RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 NET1Q7Z628 596 aaPredicted RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 SERPINA11Q86U17 422 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 KRT73Q86Y46 540 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 GRAMD2AQ8IUY3 354 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 C9orf106Q8NAJ2 232 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 HIPK4Q8NE63 616 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 LILRB4Q8NHJ6 448 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 MBD3L2Q8NHZ7 208 aaPredicted RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 WNT2BQ93097 391 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 ZNF845Q96IR2 970 aaPredicted RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 ZNF607Q96SK3 696 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 PINK1Q9BXM7 581 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 RSPO3Q9BXY4 272 aaPredicted RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 ARMC7Q9H6L4 198 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 EFCAB1Q9HAE3 211 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 CLCF1Q9UBD9 225 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 PLEKHB1Q9UF11 243 aaPredicted RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 PCNX1Q96RV3 2341 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 UTP20O75691 2785 aaKnown RBP12.55□□□□□ -0.4
USP46-209ENST00000514536 A0A0J9YW62 118 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 CFAP73A6NFT4 308 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 HSPB2A8KAH6 182 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 TNFSF11O14788 317 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 TGM6O95932 706 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 SHC1P29353 583 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 EIF1AXP47813 144 aaKnown RBP12.55□□□□□ -0.4
USP46-209ENST00000514536 EPS8Q12929 822 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 HSPB2Q16082 182 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 ZSWIM7Q19AV6 140 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 CTU2Q2VPK5 515 aaKnown RBP12.55□□□□□ -0.4
USP46-209ENST00000514536 RNF220Q5VTB9 566 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 PLEKHM3Q6ZWE6 761 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 LIX1LQ8IVB5 337 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 ZNF440Q8IYI8 595 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 NAXEQ8NCW5 288 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 CMTM5Q96DZ9 223 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 UCN2Q96RP3 112 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 SPATA5L1Q9BVQ7 753 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 UCK2Q9BZX2 261 aa12.55□□□□□ -0.4
USP46-209ENST00000514536 M0QX08 132 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 ADAMDEC1O15204 470 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 CXCL13O43927 109 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 TPST1O60507 370 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 SERPINB7O75635 380 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 PRG2P13727 222 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 COL8A1P27658 744 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 HTR1EP28566 365 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 PRDX6P30041 224 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 ACAA2P42765 397 aaKnown RBP12.54□□□□□ -0.4
USP46-209ENST00000514536 AGFG1P52594 562 aaKnown RBP12.54□□□□□ -0.4
USP46-209ENST00000514536 SELENBP1Q13228 472 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 VMACQ2NL98 169 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 HBMQ6B0K9 141 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 HIST2H2BCQ6DN03 193 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 ESPNLQ6ZVH7 1005 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 ZNF550Q7Z398 422 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 P4HA3Q7Z4N8 544 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 CALHM3Q86XJ0 350 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 OR10D3Q8NH80 312 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 OR2V1Q8NHB1 315 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 FIG4Q92562 907 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 OSTF1Q92882 214 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 INTS12Q96CB8 462 aaKnown RBP12.54□□□□□ -0.4
USP46-209ENST00000514536 ADGRG7Q96K78 797 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 KLHL15Q96M94 604 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 ZNF583Q96ND8 569 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 TM9SF2Q99805 663 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 CTPS2Q9NRF8 586 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 SERINC1Q9NRX5 453 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 USP22Q9UPT9 525 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 DOPEY1Q5JWR5 2465 aa12.54□□□□□ -0.4
USP46-209ENST00000514536 NKX2-6A6NCS4 301 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 SLC22A20A6NK97 555 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 GJE1A6NN92 205 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 FAM90A27PA6NNH2 459 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 PRSS44E7EML9 344 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 FAAHO00519 579 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 FRS3O43559 492 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 GCM2O75603 506 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms