RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 SLC25A35Q3KQZ1 300 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 PAGE3Q5JUK9 113 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 DCST1Q5T197 706 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 PDSS1Q5T2R2 415 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 GCNT6Q5T4J0 391 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 SAMD5Q5TGI4 173 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 FOXB2Q5VYV0 432 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 C3orf33Q6P1S2 294 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 CBLN3Q6UW01 205 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 DLEU7Q6UYE1 221 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 ESPNLQ6ZVH7 1005 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 DHDDSQ86SQ9 333 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 GRAMD2AQ8IUY3 354 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 MARVELD2Q8N4S9 558 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 TMCO5AQ8N6Q1 288 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 PCYOX1LQ8NBM8 494 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 LILRB4Q8NHJ6 448 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 PNPT1Q8TCS8 783 aaKnown RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 SLC25A43Q8WUT9 341 aaPredicted RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 SLC38A5Q8WUX1 472 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 WDR60Q8WVS4 1066 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 SDCCAG3Q96C92 435 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 KCTD12Q96CX2 325 aaKnown RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 ITPKCQ96DU7 683 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 THOC1Q96FV9 657 aaKnown RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 AURKBQ96GD4 344 aaPredicted RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 TREX2Q9BQ50 279 aaPredicted RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 SPATA5L1Q9BVQ7 753 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 SFXN3Q9BWM7 321 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 RUBCNLQ9H714 662 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 SAR1AQ9NR31 198 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 SLC25A37Q9NYZ2 338 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 VAPAQ9P0L0 249 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 CLCF1Q9UBD9 225 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 VDAC3Q9Y277 283 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 RPH3AQ9Y2J0 694 aaPredicted RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 AP3M1Q9Y2T2 418 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 SPIN1Q9Y657 262 aaPredicted RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 CAPN7Q9Y6W3 813 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 NPIPA5A0A0B4J1W7 369 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 PRAMEF27A3QJZ7 478 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 CLCA1A8K7I4 914 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 C5orf58C9J3I9 102 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 NPIPA7E9PJI5 369 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 H3BML4 177 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 DVL2O14641 736 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 ADAMDEC1O15204 470 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 RCBTB2O95199 551 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 NUDT14O95848 222 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 NPIPA8P0DM63 369 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 SLC6A2P23975 617 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 OPRM1P35372 400 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 APOBEC1P41238 236 aaKnown RBP7.38□□□□□ -1.23
NEDD4-210ENST00000513957 HTR3AP46098 478 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 PCYT1AP49585 367 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 CASP9P55211 416 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 SUMO1P63165 101 aaKnown RBP7.38□□□□□ -1.23
NEDD4-210ENST00000513957 CHRNEQ04844 493 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 KLF10Q13118 480 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 NFYCQ13952 458 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 CYLC2Q14093 348 aaPredicted RBP7.38□□□□□ -1.23
NEDD4-210ENST00000513957 MMEL1Q495T6 779 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 GTDC1Q4AE62 458 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 RUNDC3AQ59EK9 446 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 FAM209AQ5JX71 171 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 ARSKQ6UWY0 536 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 C3P1Q6ZMU1 363 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 ZNF550Q7Z398 422 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 GRINAQ7Z429 371 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 SPATA21Q7Z572 469 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 ARPINQ7Z6K5 226 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 SERPINA11Q86U17 422 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 KRT73Q86Y46 540 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 MSRB3Q8IXL7 192 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 ANKFN1Q8N957 763 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 GATSQ8NAP1 163 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 HIPK4Q8NE63 616 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 OR8J3Q8NGG0 315 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 RP9Q8TA86 221 aaKnown RBP7.38□□□□□ -1.23
NEDD4-210ENST00000513957 GPR119Q8TDV5 335 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 CPNE4Q96A23 557 aaPredicted RBP7.38□□□□□ -1.23
NEDD4-210ENST00000513957 TMEM19Q96HH6 336 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 SH3YL1Q96HL8 342 aaPredicted RBP7.38□□□□□ -1.23
NEDD4-210ENST00000513957 RNF145Q96MT1 663 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 ANKRD27Q96NW4 1050 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 TRIB1Q96RU8 372 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 ZNF607Q96SK3 696 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 CGREF1Q99674 301 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 CPPED1Q9BRF8 314 aaPredicted RBP7.38□□□□□ -1.23
NEDD4-210ENST00000513957 TIGARQ9NQ88 270 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 SERINC1Q9NRX5 453 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 GLRX2Q9NS18 164 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 GID8Q9NWU2 228 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 ALKBH4Q9NXW9 302 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 TNFRSF10DQ9UBN6 386 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 ZNF69Q9UC07 566 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 TAGLN3Q9UI15 199 aa7.38□□□□□ -1.23
NEDD4-210ENST00000513957 KCNE5Q9UJ90 142 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms