RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ACKR4Q9NPB9 350 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 EXOSC3Q9NQT5 275 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 ALKBH4Q9NXW9 302 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 TAS2R1Q9NYW7 299 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 CAMK2AQ9UQM7 478 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 DNAJC13O75165 2243 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 A0A1B0GVC2 190 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 CFAP73A6NFT4 308 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 TMEM229AB2RXF0 380 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 SERPINB7O75635 380 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF682O95780 498 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 SERPINA1P01009 418 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 FESP07332 822 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 GGT1P19440 569 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 PGCP20142 388 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 POU3F2P20265 443 aaPredicted RBP8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 ATP6V1B2P21281 511 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 PSMA4P25789 261 aaKnown RBP8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 HTR2AP28223 471 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 MSX1P28360 303 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 KDELR2P33947 212 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 SFTPDP35247 375 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 KCNJ5P48544 419 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 MNAT1P51948 309 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF136P52737 540 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 CLDN20P56880 219 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 RGS8P57771 180 aaPredicted RBP8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 SESN3P58005 492 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 FOXD4Q12950 439 aaPredicted RBP8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 VEZF1Q14119 521 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 NPTX1Q15818 432 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 TMEM44Q2T9K0 475 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 EMC4Q5J8M3 183 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF585AQ6P3V2 769 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 PLEKHM3Q6ZWE6 761 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 VTCN1Q7Z7D3 282 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 TSPYL5Q86VY4 417 aaPredicted RBP8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 SLC30A8Q8IWU4 369 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 FAM86B1Q8N7N1 296 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 GALNT11Q8NCW6 608 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 OIT3Q8WWZ8 545 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 PMM1Q92871 262 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 ABTB1Q969K4 478 aaPredicted RBP8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 ZBTB8AQ96BR9 441 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 ARHGDIGQ99819 225 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 THTPAQ9BU02 230 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 PINK1Q9BXM7 581 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 NDE1Q9NXR1 346 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 CD300AQ9UGN4 299 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 SLC13A4Q9UKG4 626 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 ACAD8Q9UKU7 415 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF232Q9UNY5 417 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 AP3M1Q9Y2T2 418 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF337Q9Y3M9 751 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 TENM4Q6N022 2769 aa8.85□□□□□ -0.99
TOPBP1-209ENST00000513818 UBR5O95071 2799 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 A0A087WZY1 265 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 H0Y3Z8 333 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 ARPC2O15144 300 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 GYG2O15488 501 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 EFNA2O43921 213 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 SUSD5O60279 629 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 TPST2O60704 377 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 NTN1O95631 604 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 GP1BBP13224 206 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 HSD17B1P14061 328 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF17P17021 662 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 HTR1EP28566 365 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 ACAA2P42765 397 aaKnown RBP8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 OR1E2P47887 323 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 SLC6A8P48029 635 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 LHX2P50458 406 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 ERFP50548 548 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 SUCLG1P53597 346 aaKnown RBP8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 CLDN18P56856 261 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 NCALDP61601 193 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 RBPJQ06330 500 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 MERTKQ12866 999 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 VASNQ6EMK4 673 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 GLYATQ6IB77 296 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 AAGABQ6PD74 315 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 CYP2R1Q6VVX0 501 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF550Q7Z398 422 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 GGNQ86UU5 652 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 CARM1Q86X55 608 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 GRAMD2AQ8IUY3 354 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 GTPBP8Q8N3Z3 284 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 OR6T1Q8NGN1 323 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 FAM57AQ8TBR7 257 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 SARAFQ96BY9 339 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 WDYHV1Q96HA8 205 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 HSH2DQ96JZ2 352 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 TIMP4Q99727 224 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 PIGQQ9BRB3 760 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 SH3GLB1Q9Y371 365 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 SNX13Q9Y5W8 968 aa8.84□□□□□ -0.99
TOPBP1-209ENST00000513818 A0A1B0GWA3 101 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 A0A1W2PNR3 127 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms