RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CDH5P33151 784 aaPredicted RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 ID1P41134 155 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 SLC1A6P48664 564 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 FHITP49789 147 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 TNFSF10P50591 281 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 CCR4P51679 360 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 PLK1P53350 603 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 UCP2P55851 309 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 TPI1P60174 286 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 SSTP61278 116 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 RHOAP61586 193 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 SEMG2Q02383 582 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 WASHC5Q12768 1159 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 ENPP2Q13822 863 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 KLHL40Q2TBA0 621 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 C14orf177Q52M58 125 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 MUC21Q5SSG8 566 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 AGAP7PQ5VUJ5 663 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 HIST2H2AA3Q6FI13 130 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 PPP1R2P3Q6NXS1 205 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 RBM43Q6ZSC3 357 aaKnown RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 ASRGL1Q7L266 308 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 STRADAQ7RTN6 431 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 ZNF571Q7Z3V5 609 aaPredicted RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 SETD3Q86TU7 594 aaPredicted RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 KCNMB4Q86W47 210 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 PHF13Q86YI8 300 aaPredicted RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 STHQ8IWL8 128 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 CHCHD4Q8N4Q1 142 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 EID2Q8N6I1 236 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 RTL3Q8N8U3 475 aaKnown RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 CCNYQ8ND76 341 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 BEST4Q8NFU0 473 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 OR52K2Q8NGK3 314 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 OR2T34Q8NGX1 318 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 PDCD6IPQ8WUM4 868 aaKnown RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 GTF3AQ92664 365 aaKnown RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 GLYATL1Q969I3 302 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 PPP1R16AQ96I34 528 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 CELF6Q96J87 481 aaKnown RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 FAM218AQ96MZ4 157 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 SSX3Q99909 188 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 ATF6BQ99941 703 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 BPIFA3Q9BQP9 254 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 CNPY3Q9BT09 278 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 ACPTQ9BZG2 426 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 TM6SF2Q9BZW4 377 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 XPO4Q9C0E2 1151 aaKnown RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 WWP1Q9H0M0 922 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 SUDS3Q9H7L9 328 aaPredicted RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 WDR41Q9HAD4 459 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 MRPL47Q9HD33 250 aaKnown RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 TM9SF3Q9HD45 589 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 NDUFA13Q9P0J0 144 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 COPS7AQ9UBW8 275 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 ANGPTL2Q9UKU9 493 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 CA5BQ9Y2D0 317 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 STRAPQ9Y3F4 350 aaKnown RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 BZW2Q9Y6E2 419 aaKnown RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 BRWD1Q9NSI6 2320 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 REV3LO60673 3130 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 KMT2EQ8IZD2 1858 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 TSC2P49815 1807 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 IGHV4-30-2A0A087WSY4 118 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 OR5H15A6NDH6 313 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 IGLON5A6NGN9 336 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 PRAMEF26H0Y7S4 382 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 H0YIG0 161 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 TLR4O00206 839 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 FBP2O00757 339 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 P2RX6O15547 441 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 KDELR3O43731 214 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 SDC3O75056 442 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 CSO75390 466 aaKnown RBP3.5□□□□□ -1.85
HTT-210ENST00000512909 PALMO75781 387 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 IGSF6O95976 241 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 CGAP01215 116 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 IGLV3-25P01717 112 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 UGT2B4P06133 528 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 HIST1H2AGP0C0S8 130 aaPredicted RBP3.5□□□□□ -1.85
HTT-210ENST00000512909 ZNF883P0CG24 379 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 CT45A8P0DMV1 189 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 CT45A9P0DMV2 189 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 HSD17B1P14061 328 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 MIPP30301 263 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 AKT2P31751 481 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 ARRB1P49407 418 aaPredicted RBP3.5□□□□□ -1.85
HTT-210ENST00000512909 SLC7A2P52569 658 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 METAP1P53582 386 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 CASP9P55211 416 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 HSPA14Q0VDF9 509 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 ELAVL3Q14576 367 aaKnown RBP3.5□□□□□ -1.85
HTT-210ENST00000512909 MESDQ14696 234 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 HADHQ16836 314 aaKnown RBP3.5□□□□□ -1.85
HTT-210ENST00000512909 CNPY1Q3B7I2 92 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 CT45A2Q5DJT8 189 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 ZNF613Q6PF04 617 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 ZNF497Q6ZNH5 498 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 Q6ZRG5 221 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms