RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 RPL14P50914 215 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ADARB1P78563 741 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 LCN2P80188 198 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 E2F1Q01094 437 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ROM1Q03395 351 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 BST2Q10589 180 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 FHL3Q13643 280 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 IL13RA2Q14627 380 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ACOX1Q15067 660 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 MST1LQ2TV78 715 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 COX19Q49B96 90 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM78AQ5JUQ0 283 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZFP1Q6P2D0 407 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 NPSR1Q6W5P4 371 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 GDPD3Q7L5L3 318 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 TMEM150AQ86TG1 271 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 CRLF3Q8IUI8 442 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZCCHC9Q8N567 271 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 TMEM156Q8N614 296 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ARL14EPQ8N8R7 260 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM46DQ8NEK8 389 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 BHLHE22Q8NFJ8 381 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR4C5Q8NGB2 326 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 NUBPLQ8TB37 319 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 PPP4R1Q8TF05 950 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 SUSD6Q92537 303 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 MRPS31Q92665 395 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 SCAMP4Q969E2 229 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ERGIC1Q969X5 290 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 SGTBQ96EQ0 304 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 CCDC120Q96HB5 630 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 NSL1Q96IY1 281 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 HRASLS5Q96KN8 279 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 MUS81Q96NY9 551 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ERGIC2Q96RQ1 377 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC30A2Q9BRI3 323 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 TIMM29Q9BSF4 260 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 NICN1Q9BSH3 213 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 LMF2Q9BU23 707 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ULBP1Q9BZM6 244 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM83DQ9H4H8 585 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF430Q9H8G1 570 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 PARD6AQ9NPB6 346 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 DUSP22Q9NRW4 184 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 GPR83Q9NYM4 423 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 TAS2R14Q9NYV8 317 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 MUTYHQ9UIF7 546 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC45A2Q9UMX9 530 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 B9D1Q9UPM9 204 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 EXO1Q9UQ84 846 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 MYH10P35580 1976 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 TEX13DA0A0J9YY54 714 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF99A8MXY4 864 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 POC1B-GALNT4F8VUJ3 575 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 I6L893 689 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 hCG_2039718K7EN88 272 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 SIAH2O43255 324 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 NARSO43776 548 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 EIF1BO60739 113 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 DCTN3O75935 186 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR2J3O76001 311 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR2F2O95006 317 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 MPIG6BO95866 241 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 PEX11BO96011 259 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 GYPCP04921 128 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ITGB2P05107 769 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 CRHP06850 196 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 SERPINE2P07093 398 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 LINC00614P0C842 121 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 THRAP10827 490 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 CDH1P12830 882 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 GOT1P17174 413 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 EFNA1P20827 205 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 COILP38432 576 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 EIF1P41567 113 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 NUMBP49757 651 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ART1P52961 327 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 FGF8P55075 233 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 IRX4P78413 519 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 RBBP4Q09028 425 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 NFATC3Q12968 1075 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 KCTD19Q17RG1 926 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ITPRIPL2Q3MIP1 535 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 GXYLT1Q4G148 440 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 LCLAT1Q6UWP7 414 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 MRPL21Q7Z2W9 205 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 PRICKLE2Q7Z3G6 844 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 BMP8AQ7Z5Y6 402 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 GPAT4Q86UL3 456 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 MYPOPQ86VE0 399 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 TMEM17Q86X19 198 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 FBXL6Q8N531 539 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 LRRC75AQ8NAA5 344 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 NECAP1Q8NC96 275 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 CHDHQ8NE62 594 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 NUP43Q8NFH3 380 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR13C5Q8NGS8 318 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR2V1Q8NHB1 315 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 M1APQ8TC57 530 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 CASKIN2Q8WXE0 1202 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms