RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 RBM24Q9BX46 236 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-216ENST00000511767 PRRG4Q9BZD6 226 aa14.45□□□□□ -0.1
PDLIM5-216ENST00000511767 ZNF385DQ9H6B1 395 aa14.45□□□□□ -0.1
PDLIM5-216ENST00000511767 EXOSC3Q9NQT5 275 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-216ENST00000511767 PLSCR4Q9NRQ2 329 aa14.45□□□□□ -0.1
PDLIM5-216ENST00000511767 THUMPD1Q9NXG2 353 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-216ENST00000511767 PACSIN3Q9UKS6 424 aa14.45□□□□□ -0.1
PDLIM5-216ENST00000511767 CSMD1Q96PZ7 3565 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 TRBV5-3A0A0A0MS03 114 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 DBIP07108 87 aaKnown RBP14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 NUDT7P0C024 238 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 NCF2P19878 526 aaPredicted RBP14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 RYKP34925 604 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 CCR4P51679 360 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 DSTNP60981 165 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 FAM27E3Q08E93 113 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 MYBPHQ13203 477 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 DLEU7Q6UYE1 221 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 FAM214BQ7L5A3 538 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 ADGRG3Q86Y34 549 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 CMIPQ8IY22 773 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 ZZZ3Q8IYH5 903 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 TMCO5AQ8N6Q1 288 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 ZNF610Q8N9Z0 462 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 FAM222BQ8WU58 562 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 TMEM234Q8WY98 164 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 ROBO4Q8WZ75 1007 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 RABEP2Q9H5N1 569 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 BCL2L10Q9HD36 194 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 NPHS2Q9NP85 383 aa14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 MCTS1Q9ULC4 181 aaKnown RBP14.44□□□□□ -0.1
PDLIM5-216ENST00000511767 AKAP6Q13023 2319 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 A0A0G2JPF8 293 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 TUBAL3A6NHL2 446 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 GJE1A6NN92 205 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 HNRNPCL2B2RXH8 293 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 HNRNPCL3B7ZW38 293 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 NR5A2O00482 541 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 HNRNPCL1O60812 293 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 CTAG2O75638 210 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 SYNGR4O95473 234 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 HNRNPCL4P0DMR1 293 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 CD8BP10966 210 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 EPXP11678 715 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 IL7RP16871 459 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 APOBEC1P41238 236 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 HPCAP84074 193 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 SORDQ00796 357 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 GTF2IRD2BQ6EKJ0 949 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 PLEKHM3Q6ZWE6 761 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 GTF2IRD2Q86UP8 949 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 PEX5LQ8IYB4 626 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 ARFGAP2Q8N6H7 521 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 OR52P1PQ8NH57 321 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 SIKE1Q9BRV8 207 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 CCDC106Q9BWC9 280 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 SRXN1Q9BYN0 137 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 OPN3Q9H1Y3 402 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 COQ10BQ9H8M1 238 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 TIGARQ9NQ88 270 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 GLRX2Q9NS18 164 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 RLIMQ9NVW2 624 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 DNAJB12Q9NXW2 375 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 GALNT8Q9NY28 637 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 CALML5Q9NZT1 146 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 VAPAQ9P0L0 249 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 P2RX2Q9UBL9 471 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 CHST2Q9Y4C5 530 aa14.43□□□□□ -0.1
PDLIM5-216ENST00000511767 DSPPQ9NZW4 1301 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 A0A0G2JND7 137 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 A0A1W2PNR3 127 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 SMNDC1O75940 238 aaKnown RBP eCLIP14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 FCGR2AP12318 317 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 GPX2P18283 190 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 ENPP1P22413 925 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 IDH2P48735 452 aaKnown RBP14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 CRISP3P54108 245 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 RAC3P60763 192 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 SIRPAP78324 504 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 MERTKQ12866 999 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 FADDQ13158 208 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 SELENBP1Q13228 472 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 VRK2Q86Y07 508 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 C10orf111Q8N326 155 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 CLIP4Q8N3C7 705 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 TMEM19Q96HH6 336 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 GMPPAQ96IJ6 420 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 RSPO3Q9BXY4 272 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 RAD21L1Q9H4I0 556 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 SERINC1Q9NRX5 453 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 PRDM4Q9UKN5 801 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 CLEC4AQ9UMR7 237 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 ZNF232Q9UNY5 417 aa14.42□□□□□ -0.1
PDLIM5-216ENST00000511767 CCDC168Q8NDH2 2452 aa14.41□□□□□ -0.1
PDLIM5-216ENST00000511767 CDHR4A6H8M9 788 aa14.41□□□□□ -0.1
PDLIM5-216ENST00000511767 FAAHO00519 579 aa14.41□□□□□ -0.1
PDLIM5-216ENST00000511767 AP3D1O14617 1153 aa14.41□□□□□ -0.1
PDLIM5-216ENST00000511767 ATP8B1O43520 1251 aa14.41□□□□□ -0.1
PDLIM5-216ENST00000511767 SS18L1O75177 396 aaPredicted RBP14.41□□□□□ -0.1
PDLIM5-216ENST00000511767 PABPC4LP0CB38 370 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms