RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 MED17Q9NVC6 651 aa6.82□□□□□ -1.32
CPNE4-208ENST00000511604 NLE1Q9NVX2 485 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-208ENST00000511604 TMEM248Q9NWD8 314 aa6.82□□□□□ -1.32
CPNE4-208ENST00000511604 SPG21Q9NZD8 308 aa6.82□□□□□ -1.32
CPNE4-208ENST00000511604 TESQ9UGI8 421 aaKnown RBP6.82□□□□□ -1.32
CPNE4-208ENST00000511604 NDOR1Q9UHB4 597 aa6.82□□□□□ -1.32
CPNE4-208ENST00000511604 RASD1Q9Y272 281 aa6.82□□□□□ -1.32
CPNE4-208ENST00000511604 PLXNA1Q9UIW2 1896 aa6.82□□□□□ -1.32
CPNE4-208ENST00000511604 LAMA3Q16787 3333 aa6.82□□□□□ -1.32
CPNE4-208ENST00000511604 DSPPQ9NZW4 1301 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 XIRP2A4UGR9 3374 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 KANTRA0A1W2PQU2 76 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 SULT2B1O00204 365 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 CLIC1O00299 241 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 HSPA12AO43301 675 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 CIDEAO60543 219 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 SH3BGRLO75368 114 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 RDH16O75452 317 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 CBR3O75828 277 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 IL5P05113 134 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 DPEP1P16444 411 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 SOX18P35713 384 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 MAGEB1P43366 347 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 WNT3P56703 355 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 SLC26A5P58743 744 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 RBX1P62877 108 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 PITPNAQ00169 270 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 VEZF1Q14119 521 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 TTLL4Q14679 1199 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 HEPACAMQ14CZ8 416 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 OCLNQ16625 522 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 C2orf68Q2NKX9 166 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 SCGB2B2Q4G0G5 96 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ELFN2Q5R3F8 820 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 JMJD6Q6NYC1 403 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 PRSS55Q6UWB4 352 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 PARGQ86W56 976 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ANGPTL5Q86XS5 388 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 RGL4Q8IZJ4 473 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 CLECL1Q8IZS7 167 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 TCEANCQ8N8B7 351 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 OR51S1Q8NGJ8 323 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 SPPL3Q8TCT6 385 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ISOC2Q96AB3 205 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 MTERF1Q99551 399 aaKnown RBP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 EGFL8Q99944 293 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ACBD6Q9BR61 282 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ZNF471Q9BX82 626 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 TMEM185BQ9H7F4 350 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 SEC61A2Q9H9S3 476 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 CERS4Q9HA82 394 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 NMRK2Q9NPI5 230 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 MEPEQ9NQ76 525 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ZSCAN32Q9NX65 697 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ELOVL2Q9NXB9 296 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 MRPL15Q9P015 296 aaKnown RBP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ST3GAL5Q9UNP4 418 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 MOKQ9UQ07 419 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 RCE1Q9Y256 329 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ZNF646O15015 1829 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 A0A1W2PPH5 198 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ADAM10O14672 748 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 MATN3O15232 486 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 FGF16O43320 207 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 KLK8O60259 260 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 DIRAS3O95661 229 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 GASTP01350 101 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 GPX2P18283 190 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 CELP19835 753 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 OPRD1P41143 372 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 MNDAP41218 407 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 GATMP50440 423 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 GEMP55040 296 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 INSM1Q01101 510 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 TRA2AQ13595 282 aaKnown RBP eCLIP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 KIAA0141Q14154 515 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ZNF630Q2M218 657 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 DCAF12L2Q5VW00 463 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 OR10K2Q6IF99 312 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 DEGS2Q6QHC5 323 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 CLEC20AQ6ZU45 233 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ABHD13Q7L211 337 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ZNF546Q86UE3 836 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 VRK3Q8IV63 474 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 OR52B4Q8NGK2 314 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 HAVCR2Q8TDQ0 301 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 HMGB4Q8WW32 186 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 C22orf15Q8WYQ4 148 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 NOL4LQ96MY1 436 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 NECAB3Q96P71 396 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-208ENST00000511604 AUNIPQ9H7T9 357 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 TUBA4BQ9H853 241 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 POPDC3Q9HBV1 291 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 HRASLSQ9HDD0 168 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 RPS10P5Q9NQ39 176 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 SEMA3GQ9NS98 782 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 KLK14Q9P0G3 267 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 SLC22A14Q9Y267 594 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 ASF1AQ9Y294 204 aa6.81□□□□□ -1.32
CPNE4-208ENST00000511604 PCDHB1Q9Y5F3 818 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms