RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ONECUT1Q9UBC0 465 aa2.45□□□□□ -2.02
TRAPPC11-207ENST00000511409 WARS2Q9UGM6 360 aaKnown RBP2.45□□□□□ -2.02
TRAPPC11-207ENST00000511409 LCMT1Q9UIC8 334 aa2.45□□□□□ -2.02
TRAPPC11-207ENST00000511409 ANGPTL2Q9UKU9 493 aa2.45□□□□□ -2.02
TRAPPC11-207ENST00000511409 NPIPA1Q9UND3 350 aa2.45□□□□□ -2.02
TRAPPC11-207ENST00000511409 MRPS33Q9Y291 106 aaKnown RBP2.45□□□□□ -2.02
TRAPPC11-207ENST00000511409 KIF25-AS1Q9Y6Z4 181 aa2.45□□□□□ -2.02
TRAPPC11-207ENST00000511409 CHD4Q14839 1912 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 IGHV7-81A0A0B4J1V7 117 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 A0A1W2PNV4 684 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 RS1O15537 224 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 PRKYO43930 277 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 GNA14O95837 355 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 SEMG1P04279 462 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 GCFC2P16383 781 aaKnown RBP2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 ZNF19P17023 458 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 POLR2EP19388 210 aaKnown RBP2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 CYP2B6P20813 491 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 NMT1P30419 496 aaKnown RBP2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 RDXP35241 583 aaKnown RBP2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 PRPHP41219 470 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 PRKXP51817 358 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 PLK1P53350 603 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 HSPA2P54652 639 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 RIPK4P57078 832 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 ELAVL3Q14576 367 aaKnown RBP2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 TAF7Q15545 349 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 TP53I3Q53FA7 332 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 CFAP157Q5JU67 520 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 ATAD3BQ5T9A4 648 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 TTC23Q5W5X9 447 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 PYHIN1Q6K0P9 492 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 FAM71F2Q6NXP2 309 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 SYT10Q6XYQ8 523 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 SCARA5Q6ZMJ2 495 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 PPP1R27Q86WC6 154 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 TMEM252Q8N6L7 170 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 SYT14Q8NB59 555 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 GMCL1P1Q8NEA9 526 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 TRMT10AQ8TBZ6 339 aaKnown RBP2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 PAQR8Q8TEZ7 354 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 FAM3CQ92520 227 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 C7orf34Q96L11 122 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 AMDHD1Q96NU7 426 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 GLIPR2Q9H4G4 154 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 PDFQ9HBH1 243 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 CD274Q9NZQ7 290 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 RPH3ALQ9UNE2 315 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 CELA1Q9UNI1 258 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 SCML2Q9UQR0 700 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 ZNF256Q9Y2P7 627 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 IFT52Q9Y366 437 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 CROCCQ5TZA2 2017 aa2.44□□□□□ -2.02
TRAPPC11-207ENST00000511409 TTC21BQ7Z4L5 1316 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 CLSPNQ9HAW4 1339 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 IGHV1OR15-1A0A075B7D0 117 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 A0A1B0GWB2 263 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 MBLAC1A4D2B0 266 aaPredicted RBP2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 VSTM2BA6NLU5 285 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 MAGEB3O15480 346 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 SLITRK3O94933 977 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 ACTL6AO96019 429 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 LALBAP00709 142 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 DNAH10OSP0CZ25 163 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 RNH1P13489 461 aaKnown RBP2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 HNF1AP20823 631 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 FGF9P31371 208 aaPredicted RBP2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 YWHABP31946 246 aaKnown RBP2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 CD80P33681 288 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 RBMXP38159 391 aaKnown RBP2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 LEPP41159 167 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 PPT1P50897 306 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 CHRNB3Q05901 458 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 CCDC173Q0VFZ6 552 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 MESDQ14696 234 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 SPATA46Q5T0L3 261 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 TPGS2Q68CL5 300 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 TMEM225Q6GV28 225 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 CCDC80Q76M96 950 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 SH2D6Q7Z4S9 175 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 C17orf82Q86X59 251 aaPredicted RBP2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 TGIF2LYQ8IUE0 185 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 CCDC65Q8IXS2 484 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 ZNF683Q8IZ20 524 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 TMEM123Q8N131 208 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 CLEC4FQ8N1N0 589 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 ZNF540Q8NDQ6 660 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 BBS1Q8NFJ9 593 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 LINC01006Q8NI28 216 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 MAIP1Q8WWC4 291 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 TXN2Q99757 166 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 GAL3ST1Q99999 423 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 SRXN1Q9BYN0 137 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 RHBGQ9H310 441 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 IL36GQ9NZH8 169 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 PCSK1NQ9UHG2 260 aa2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 MRPS7Q9Y2R9 242 aaKnown RBP2.43□□□□□ -2.02
TRAPPC11-207ENST00000511409 LRP5LA4QPB2 252 aa2.42□□□□□ -2.02
TRAPPC11-207ENST00000511409 METTL21EPA6NDL7 271 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms