RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 BCL2L15Q5TBC7 163 aa4.74□□□□□ -1.65
PHF3-210ENST00000509876 BTN2A1Q7KYR7 527 aa4.74□□□□□ -1.65
PHF3-210ENST00000509876 PELI3Q8N2H9 469 aa4.74□□□□□ -1.65
PHF3-210ENST00000509876 OR7G2Q8NG99 324 aa4.74□□□□□ -1.65
PHF3-210ENST00000509876 ZFP90Q8TF47 636 aa4.74□□□□□ -1.65
PHF3-210ENST00000509876 BPIFA2Q96DR5 249 aa4.74□□□□□ -1.65
PHF3-210ENST00000509876 SCARF2Q96GP6 870 aaPredicted RBP4.74□□□□□ -1.65
PHF3-210ENST00000509876 TMEM80Q96HE8 168 aa4.74□□□□□ -1.65
PHF3-210ENST00000509876 KLHL15Q96M94 604 aa4.74□□□□□ -1.65
PHF3-210ENST00000509876 RDH12Q96NR8 316 aa4.74□□□□□ -1.65
PHF3-210ENST00000509876 CLCC1Q96S66 551 aa4.74□□□□□ -1.65
PHF3-210ENST00000509876 NUDT9Q9BW91 350 aa4.74□□□□□ -1.65
PHF3-210ENST00000509876 EBF2Q9HAK2 575 aa4.74□□□□□ -1.65
PHF3-210ENST00000509876 NOP16Q9Y3C1 178 aaKnown RBP4.74□□□□□ -1.65
PHF3-210ENST00000509876 LOC100130705A0A1B0GUX0 176 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 A6NLC8 198 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 KCNK2O95069 426 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 EML2O95834 649 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 SOD1P00441 154 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 MT-ATP6P00846 226 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 NUP62P37198 522 aaPredicted RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 SOX3P41225 446 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 CRISP1P54107 249 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 TPTEP56180 551 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ADAM8P78325 824 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 CEACAM7Q14002 265 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 MLC1Q15049 377 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ZNF613Q6PF04 617 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 MRPL21Q7Z2W9 205 aaKnown RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 GPR155Q7Z3F1 870 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 MRGPREQ86SM8 312 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 PAPD5Q8NDF8 572 aaKnown RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 PLPP5Q8NEB5 264 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ZNF675Q8TD23 568 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ADAMTS16Q8TE57 1224 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 MRGPRX4Q96LA9 322 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 CPPED1Q9BRF8 314 aaPredicted RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 BCL2L14Q9BZR8 327 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 VAPAQ9P0L0 249 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 SH2B3Q9UQQ2 575 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 FRS3O43559 492 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 MTRF1O75570 445 aaKnown RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 ZNF432O94892 652 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 VAMP5O95183 116 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 LCKP06239 509 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ENTPD1P49961 510 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ECH1Q13011 328 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 GAB1Q13480 694 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 MICAQ29983 383 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ZBED5Q49AG3 693 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 SLC16A14Q7RTX9 510 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 CLVS1Q8IUQ0 354 aaPredicted RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 TIGD4Q8IY51 512 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 BEST3Q8N1M1 668 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 SLC38A5Q8WUX1 472 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ACOT11Q8WXI4 607 aaPredicted RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 HCAR1Q9BXC0 346 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 C12orf49Q9H741 205 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ZNF223Q9UK11 482 aaPredicted RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 RASD1Q9Y272 281 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 PCDHGA7Q9Y5G6 932 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 FNDC1Q4ZHG4 1894 aaPredicted RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 ENO4A6NNW6 628 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ANKRD30BLA7E2S9 258 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ITGA5P08648 1049 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 RPS23P62266 143 aaKnown RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 EIF2B1Q14232 305 aaKnown RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 DUSP5Q16690 384 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ANKDD1AQ495B1 522 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 RBM48Q5RL73 367 aaKnown RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 ZNF57Q68EA5 555 aaPredicted RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 ZNF425Q6IV72 752 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 LANCL3Q6ZV70 420 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 CAMKMTQ7Z624 323 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 VTCN1Q7Z7D3 282 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 OR8H2Q8N162 312 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 AMER2Q8N7J2 671 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 CHST4Q8NCG5 386 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 OR4K13Q8NH42 304 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 SPNS1Q9H2V7 528 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 APMAPQ9HDC9 416 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 PRDM7Q9NQW5 492 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 CCM2LQ9NUG4 571 aaPredicted RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 CMTM6Q9NX76 183 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 PCDHB10Q9UN67 800 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 PRRC2BQ5JSZ5 2229 aaKnown RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 SHROOM3Q8TF72 1996 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 TET1Q8NFU7 2136 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ZNF12P17014 697 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 GALNSP34059 522 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 MAP4K2Q12851 820 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 CBX3Q13185 183 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 ZIC1Q15915 447 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 EIF2S3LQ2VIR3 472 aaKnown RBP4.73□□□□□ -1.65
PHF3-210ENST00000509876 C6orf52Q5T4I8 152 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 KLHDC8BQ8IXV7 354 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 LILRA2Q8N149 483 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 SLC43A2Q8N370 569 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 TCEANCQ8N8B7 351 aa4.73□□□□□ -1.65
PHF3-210ENST00000509876 TM9SF2Q99805 663 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms