RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 OR51I1Q9H343 314 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 BCO1Q9HAY6 547 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 HAO1Q9UJM8 370 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 MKLN1Q9UL63 735 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 RAP2CQ9Y3L5 183 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 TRIM64A6NGJ6 449 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 TRIM64BA6NI03 449 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 ZNF814B7Z6K7 855 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 HS3ST1O14792 307 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 SMAD9O15198 467 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 TM9SF1O15321 606 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 RGS16O15492 202 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 BCAS1O75363 584 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 STX11O75558 287 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 PRKD3O94806 890 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 YES1P07947 543 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 UBTFL6P0CB48 400 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 PAX1P15863 534 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 RPL14P50914 215 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 RAC3P60763 192 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 PLAURQ03405 335 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 MPP2Q14168 576 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 MAPK14Q16539 360 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 SFRP5Q5T4F7 317 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 C16orf62Q7Z3J2 963 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 RAB3IL1Q8TBN0 382 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 ST8SIA1Q92185 356 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 TESCQ96BS2 214 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 DPY30Q9C005 99 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 QRSL1Q9H0R6 528 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 KLHL9Q9P2J3 617 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 PLCE1Q9P212 2302 aa11.55□□□□□ -0.56
HMGCS1-205ENST00000508319 PRSS51A0A1B0GVH4 220 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 CYP7B1O75881 506 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 LY6G6DO95868 133 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 CSTAP01040 98 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 GUSBP08236 651 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 OR12D1P0DN82 309 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 BGNP21810 368 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 UQCRC2P22695 453 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 EDNRAP25101 427 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 PGM1P36871 562 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 OR3A2P47893 321 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 SLC1A6P48664 564 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 SESN3P58005 492 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 CASP8Q14790 479 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 P2RY6Q15077 328 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 TAB1Q15750 504 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 TNFAIP8L3Q5GJ75 292 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 SPANXN4Q5MJ08 99 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 SAXO2Q658L1 398 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 ABLIM2Q6H8Q1 611 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 TYW3Q6IPR3 259 aaKnown RBP11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 TNFAIP8L2Q6P589 184 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 FRRS1Q6ZNA5 592 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 EIF3MQ7L2H7 374 aaKnown RBP11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 LRRC34Q8IZ02 419 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 ZNF611Q8N823 705 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 OIT3Q8WWZ8 545 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 RAB8BQ92930 207 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 OR5B2Q96R09 309 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 TACO1Q9BSH4 297 aaKnown RBP11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 THUMPD3Q9BV44 507 aaKnown RBP11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 HDHD5Q9BXW7 423 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 POTEKPQ9BYX7 375 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 NUF2Q9BZD4 464 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 MEAF6Q9HAF1 191 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 ZNF701Q9NV72 531 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 EXD2Q9NVH0 621 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 DNHD1Q96M86 4753 aa11.54□□□□□ -0.56
HMGCS1-205ENST00000508319 SONP18583 2426 aaKnown RBP11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 PRAMEF27A3QJZ7 478 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 FAM171A2A8MVW0 826 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 E9PBE3 544 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 CYTIPO60759 359 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 TMCC2O75069 709 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 SNUPNO95149 360 aaKnown RBP11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 ADAP00813 363 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 C1QCP02747 245 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 PGCP20142 388 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 IL32P24001 234 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 DIO1P49895 249 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 CLNS1AP54105 237 aaKnown RBP11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 MERTKQ12866 999 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 DPY19L1Q2PZI1 675 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 SYT14P1Q58G82 188 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 NCMAPQ5T1S8 102 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 ANXA8L1Q5VT79 327 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 AP1ARQ63HQ0 302 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 OGFOD2Q6N063 350 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 ALKBH2Q6NS38 261 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 ADAM5Q6NVV9 412 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 Q6ZT83 130 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 ATG4DQ86TL0 474 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 ZNF619Q8N2I2 560 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 LILRB1Q8NHL6 650 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 SLC25A43Q8WUT9 341 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 TMEM171Q8WVE6 324 aa11.53□□□□□ -0.56
HMGCS1-205ENST00000508319 AKAP1Q92667 903 aaKnown RBP eCLIP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms