RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 AESQ08117 197 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 CDH18Q13634 790 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 EZH2Q15910 746 aaKnown RBP6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 C17orf107Q6ZR85 190 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 TTLL10Q6ZVT0 673 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 TMPRSS11BQ86T26 416 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 AMIGO1Q86WK6 493 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 LDLRAD3Q86YD5 345 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 PHF13Q86YI8 300 aaPredicted RBP6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 TMPRSS6Q8IU80 811 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 ERI1Q8IV48 349 aaKnown RBP6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 OR11L1Q8NGX0 322 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 TMEM170AQ8WVE7 144 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 ZNF75AQ96N20 296 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 FMO2Q99518 471 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 TM6SF1Q9BZW5 370 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 EGLN3Q9H6Z9 239 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 ZNF430Q9H8G1 570 aaPredicted RBP6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 PRDM7Q9NQW5 492 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 CTPS2Q9NRF8 586 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 ECHDC1Q9NTX5 307 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 C1orf109Q9NX04 203 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 BABAM2Q9NXR7 383 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 PSG11Q9UQ72 335 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 PDE10AQ9Y233 779 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 NDUFAF1Q9Y375 327 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 TUBGCP6Q96RT7 1819 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 ZNF142P52746 1687 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 TCRBV7S3A2A0A539 114 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 H7C0C1 242 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 TCAPO15273 167 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 ZMPSTE24O75844 475 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 ZBTB7AO95365 584 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 PEX11BO96011 259 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 ETFAP13804 333 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 ZNF23P17027 643 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 KIR2DL3P43628 341 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 GSSP48637 474 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 MVKQ03426 396 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 CHRNEQ04844 493 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 DNASE1L3Q13609 305 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 OR4D1Q15615 310 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 NPTX1Q15818 432 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 GCSAMLQ5JQS6 135 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 LYPLAL1Q5VWZ2 237 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 SYPL2Q5VXT5 272 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 TCEAL6Q6IPX3 200 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 SLC16A12Q6ZSM3 486 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 LYG2Q86SG7 212 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 CALHM1Q8IU99 346 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 UBL4BQ8N7F7 174 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 EXD3Q8N9H8 876 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 OR4Q3Q8NH05 313 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 WFIKKN2Q8TEU8 576 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 PPWD1Q96BP3 646 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 PYCR2Q96C36 320 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 SGTBQ96EQ0 304 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 CXorf58Q96LI9 332 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 MBOAT4Q96T53 435 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 TMEM109Q9BVC6 243 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 DPCDQ9BVM2 203 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 IFT27Q9BW83 186 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 RHOJQ9H4E5 214 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 PARD6AQ9NPB6 346 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 GNG12Q9UBI6 72 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 FZD4Q9ULV1 537 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 POLDIP2Q9Y2S7 368 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 NPHP4O75161 1426 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 ANKARQ7Z5J8 1434 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 JCADQ9P266 1359 aa6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 FAM208AQ9UK61 1670 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-206ENST00000508170 A6NIZ1 184 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 H0Y980 276 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 CLDN34H7C241 214 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 TOM1O60784 492 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 UTS2O95399 124 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 WNT11O96014 354 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 ADRB3P13945 408 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 ZNF12P17014 697 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 BCKDHBP21953 392 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 CD1CP29017 333 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 CHRNA5P30532 468 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 GGCXP38435 758 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 GDNFP39905 211 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 CXADRP78310 365 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 SLC18A2Q05940 514 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 TPBGQ13641 420 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 IDNKQ5T6J7 187 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 TMEM200BQ69YZ2 307 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 LINGO4Q6UY18 593 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 ASB18Q6ZVZ8 466 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 CD163Q86VB7 1156 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 FITM2Q8N6M3 262 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 OR5AU1Q8NGC0 362 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 OR4A4PQ8NGN8 299 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 RNASE11Q8TAA1 199 aaKnown RBP6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 TFGQ92734 400 aaPredicted RBP6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 MARC2Q969Z3 335 aa6.82□□□□□ -1.32
PDGFRA-206ENST00000508170 PTH2Q96A98 100 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms